RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 FAM216AQ8WUB2 273 aa11.85□□□□□ -0.51
COL13A1-204ENST00000398975 ZFAND2BQ8WV99 257 aa11.85□□□□□ -0.51
COL13A1-204ENST00000398975 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL13A1-204ENST00000398975 HMG20AQ9NP66 347 aa11.85□□□□□ -0.51
COL13A1-204ENST00000398975 ZNF281Q9Y2X9 895 aa11.85□□□□□ -0.51
COL13A1-204ENST00000398975 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 A0A0U1RQK1 487 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 PNMA8CA0A1B0GUJ8 204 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 A0A1W2PQ09 198 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 A0A1W2PRD5 423 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 A0A1W2PRF3 423 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 A0A1W2PRM7 423 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 MAGEA13PA6NCF6 341 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 PSPNO60542 156 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 HAND1O96004 215 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 CDK1P06493 297 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 HCKP08631 526 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 RPSAP08865 295 aaKnown RBP11.84□□□□□ -0.51
COL13A1-204ENST00000398975 CCL3L1P16619 93 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 PRKACAP17612 351 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 MYF6P23409 242 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 DLX6P56179 175 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 RPL31P62899 125 aaKnown RBP11.84□□□□□ -0.51
COL13A1-204ENST00000398975 BAMBIQ13145 260 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 ZNF146Q15072 292 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 SLC9A3R2Q15599 337 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
COL13A1-204ENST00000398975 IZUMO2Q6UXV1 221 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 C1orf122Q6ZSJ8 110 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 STX19Q8N4C7 294 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 ASCC1Q8N9N2 400 aaKnown RBP11.84□□□□□ -0.51
COL13A1-204ENST00000398975 TMEM106AQ96A25 262 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 FAM234AQ9H0X4 552 aa11.84□□□□□ -0.51
COL13A1-204ENST00000398975 UNKLQ9H9P5 680 aaKnown RBP11.84□□□□□ -0.51
COL13A1-204ENST00000398975 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
COL13A1-204ENST00000398975 LSM2Q9Y333 95 aaKnown RBP11.84□□□□□ -0.51
COL13A1-204ENST00000398975 TRAV8-7A0A075B6U6 113 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 TRBV5-7A0A0A0MS05 114 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 PTGES3LE9PB15 166 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 TRIM77I1YAP6 450 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 M0R1W7 72 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 GABRPO00591 440 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 PIN1P1O15428 100 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 ATP6V1G2O95670 118 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 CHRM2P08172 466 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 OCM2P0CE71 109 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 IGFBP3P17936 291 aaPredicted RBP11.83□□□□□ -0.52
COL13A1-204ENST00000398975 RAB3AP20336 220 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 PRTN3P24158 256 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 WNT4P56705 351 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 SLC35A2P78381 396 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 IRF3Q14653 427 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 Q8IYB0 196 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 SAXO1Q8IYX7 474 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 OR4S1Q8NGB4 309 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 AJUBAQ96IF1 538 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 OR5M11Q96RB7 305 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 ANKRD60Q9BZ19 345 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 CHST6Q9GZX3 395 aa11.83□□□□□ -0.52
COL13A1-204ENST00000398975 CHCHD3Q9NX63 227 aaKnown RBP11.83□□□□□ -0.52
COL13A1-204ENST00000398975 HOXA3O43365 443 aaPredicted RBP11.82□□□□□ -0.52
COL13A1-204ENST00000398975 MELTFP08582 738 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 OCMP0CE72 109 aaPredicted RBP11.82□□□□□ -0.52
COL13A1-204ENST00000398975 TMEM225BP0DP42 221 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 OR3A1P47881 315 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 BPIFB3P59826 476 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 MED21Q13503 144 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 RIPK1Q13546 671 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 INSL4Q14641 139 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 RNLSQ5VYX0 342 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 Q6P435 159 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 RBMS3Q6XE24 437 aaKnown RBP11.82□□□□□ -0.52
COL13A1-204ENST00000398975 Q6YL49 198 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 CMTM4Q8IZR5 234 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 OR8H2Q8N162 312 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 TPRX1Q8N7U7 411 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 ZSCAN4Q8NAM6 433 aaPredicted RBP11.82□□□□□ -0.52
COL13A1-204ENST00000398975 C17orf50Q8WW18 174 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 OR14A2Q96R54 314 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 CDCA4Q9BXL8 241 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 DUSP21Q9H596 190 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 METTL8Q9H825 291 aaKnown RBP11.82□□□□□ -0.52
COL13A1-204ENST00000398975 NEK6Q9HC98 313 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 ZNF581Q9P0T4 197 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 GSTK1Q9Y2Q3 226 aa11.82□□□□□ -0.52
COL13A1-204ENST00000398975 A0A1W2PPK0 400 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 TMEM89A2RUT3 159 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 H0YHG0 523 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 CLDN34H7C241 214 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 SIRPB1O00241 398 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 MYL12BO14950 172 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 OR2H2O95918 312 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 CYB5AP00167 134 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 RNASE1P07998 156 aaKnown RBP11.81□□□□□ -0.52
COL13A1-204ENST00000398975 CELP19835 753 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 OR3A4PP47883 348 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 Q499Y3 187 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 YIF1BQ5BJH7 314 aa11.81□□□□□ -0.52
COL13A1-204ENST00000398975 ASCL4Q6XD76 172 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms