RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 KLHL13Q9P2N7 655 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 DEDDO75618 318 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 FOSL2P15408 326 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 FHITP49789 147 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 AFF3P51826 1226 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 CARFQ8N187 725 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 NOXO1Q8NFA2 376 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 PRRX2Q99811 253 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 GINS3Q9BRX5 216 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 MOB1AQ9H8S9 216 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 E9PLN8 166 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 IGHG1P01857 330 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 GLIPR1P48060 266 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 NXPH1P58417 271 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 PLEKHA2Q9HB19 425 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 WDR87Q6ZQQ6 2873 aa13.97□□□□□ -0.17
CHMP1A-201ENST00000397901 CCDC85CA6NKD9 419 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF814B7Z6K7 855 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 M0R143 59 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 MASP2O00187 686 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 DLEU1O43261 78 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 HPNP05981 417 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 PGA4P0DJD7 388 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 PGA3P0DJD8 388 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 SERPINA2P20848 420 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 BLVRBP30043 206 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 PTGER4P35408 488 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 DLK1P80370 383 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 GAGE1Q13065 139 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 APCDD1LQ8NCL9 501 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 RCC1LQ96I51 464 aaKnown RBP13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF701Q9NV72 531 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 CEP192Q8TEP8 1941 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 ABCA7Q8IZY2 2146 aa13.96□□□□□ -0.17
CHMP1A-201ENST00000397901 CNTRLQ7Z7A1 2325 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 IGHV1OR21-1A0A087WYE8 117 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 A0A1W2PNV4 684 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 FIGNL2A6NMB9 653 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 KLK2P20151 261 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF41P51814 821 aaPredicted RBP13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 IAH1Q2TAA2 248 aaPredicted RBP13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 CHRFAM7AQ494W8 412 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 PRR18Q8N4B5 295 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 NAXEQ8NCW5 288 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 RARRES2Q99969 163 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 OPN3Q9H1Y3 402 aaPredicted RBP13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 ELL3Q9HB65 397 aaPredicted RBP13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 TCFL5Q9UL49 500 aa13.96□□□□□ -0.18
CHMP1A-201ENST00000397901 RALGAPA1Q6GYQ0 2036 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 HSD17B6O14756 317 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 TOX3O15405 576 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 LINC00614P0C842 121 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 TAS2R46P59540 309 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 TMEM183AQ8IXX5 376 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 ERGIC1Q969X5 290 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 FAM210BQ96KR6 192 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 PNRC2Q9NPJ4 139 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 MRPS17Q9Y2R5 130 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 SPAG17Q6Q759 2223 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 IGKV1D-8A0A087WSZ0 117 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 IL18BPO95998 194 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 GCGP01275 180 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 METTL15P1P0C7V9 234 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 GABRR1P24046 479 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 APLNRP35414 380 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 PPP1CCP36873 323 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 P2RY1P47900 373 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 KISS1Q15726 138 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 D2HGDHQ8N465 521 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 POC1BQ8TC44 478 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 PRO3102Q9H379 93 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 FGF21Q9NSA1 209 aa13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 C14orf166Q9Y224 244 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-201ENST00000397901 TRBV11-1A0A0K0K1C0 115 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 TRAF3IP2O43734 574 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 C1QL1O75973 258 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 DFFBO76075 338 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 OR5H8P0DN80 308 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 SFTPDP35247 375 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 RBMXP38159 391 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 TDGF1P3P51864 188 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 RSPO4Q2I0M5 234 aaPredicted RBP13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 DOK3Q7L591 496 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 EMG1Q92979 244 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 TVP23CQ96ET8 276 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 SHDQ96IW2 340 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 GPR87Q9BY21 358 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 PECRQ9BY49 303 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 LSM5Q9Y4Y9 91 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 MYO7BQ6PIF6 2116 aa13.94□□□□□ -0.18
CHMP1A-201ENST00000397901 RBFOX3A6NFN3 312 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 SCGB1D2O95969 90 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 SUMO3P55854 103 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 DCAF10Q5QP82 559 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 ZNF429Q86V71 674 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 C1orf87Q8N0U7 546 aa13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 BSCL2Q96G97 398 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-201ENST00000397901 PGAM5Q96HS1 289 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms