RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 GPR137BO60478 399 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 OR5H8P0DN80 308 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 MEOX1P50221 254 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF92Q03936 586 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 RBPJQ06330 500 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 SMIM21Q3B7S5 101 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 C6orf183Q5T699 404 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 PUSL1Q8N0Z8 303 aaKnown RBP5.07□□□□□ -1.6
PTPRD-206ENST00000397617 RAB39BQ96DA2 213 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 OR2J1Q9GZK6 312 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 HLA-AP01891 365 aaKnown RBP5.07□□□□□ -1.6
PTPRD-206ENST00000397617 RLN1P04808 185 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 BLVRBP30043 206 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-206ENST00000397617 UBE2V2Q15819 145 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF718Q3SXZ3 478 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF880Q6PDB4 577 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 FAM57BQ71RH2 274 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 KLHDC3Q9BQ90 382 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 PIGLQ9Y2B2 252 aa5.07□□□□□ -1.6
PTPRD-206ENST00000397617 RP2O75695 350 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 PRSS54Q6PEW0 395 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 S100A7AQ86SG5 101 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 LDLRAD3Q86YD5 345 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 OR51S1Q8NGJ8 323 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 SCARB1Q8WTV0 552 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 MARS2Q96GW9 593 aaKnown RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 ELL3Q9HB65 397 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 BRCA2P51587 3418 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 hCG_2014768A0A024R1R8 64 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TRAPPC6AO75865 159 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 AMY2BP19961 511 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 RAB1AP62820 205 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 PLGLB1Q02325 96 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 SLC22A6Q4U2R8 563 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 SLC38A6Q8IZM9 456 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM104Q8NE00 496 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 FBXO17Q96EF6 278 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TRIM77I1YAP6 450 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TOR1AO14656 332 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM225BP0DP42 221 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 PTAFRP25105 342 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 VEGFCP49767 419 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 GSG1LQ6UXU4 331 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 YRDCQ86U90 279 aaKnown RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 SKA3Q8IX90 412 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 REEP6Q96HR9 211 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 UNKLQ9H9P5 680 aaKnown RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 CHMP1AQ9HD42 196 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 UMAD1C9J7I0 102 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 F5H5K5 113 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 DVL2O14641 736 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 PVALBP20472 110 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 GZMHP20718 246 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TXNDC17Q9BRA2 123 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 RANGRFQ9HD47 186 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 SLC2A9Q9NRM0 540 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 LANCL1O43813 399 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 ADRB1P08588 477 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 BLOC1S1P78537 153 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 CHRFAM7AQ494W8 412 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 C4orf46Q504U0 113 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 MBNL2Q5VZF2 373 aaKnown RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TEX261Q6UWH6 196 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 C16orf47Q6ZP98 133 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 UBAC2Q8NBM4 344 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM56Q96MV1 263 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 UBQLN2Q9UHD9 624 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 NUP50Q9UKX7 468 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM56-RWDD3S4R434 201 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 U3KQ87 197 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 DSCAMO60469 2012 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 FAM171A2A8MVW0 826 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TRAPPC2LH3BP13 241 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 PYCARD-AS1I3L0S3 204 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 ZG16O60844 167 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 SFT2D2O95562 160 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 MOB3CQ70IA8 216 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 ADTRPQ96IZ2 230 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 SRXN1Q9BYN0 137 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 MFFQ9GZY8 342 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 MMP28Q9H239 520 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TNFSF18Q9UNG2 199 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 TMEM8BA6NDV4 472 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 B4GALT1P15291 398 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 PER3P56645 1201 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 MRPS11P82912 194 aaKnown RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF324BQ6AW86 544 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 C8orf31Q8N9H6 132 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 OR5T2Q8NGG2 359 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 PMEPA1Q969W9 287 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 C2orf50Q96LR7 162 aa5.06□□□□□ -1.6
PTPRD-206ENST00000397617 CMSS1Q9BQ75 279 aaKnown RBP5.06□□□□□ -1.6
PTPRD-206ENST00000397617 NOTCH3Q9UM47 2321 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 F8VVB4 439 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 F8VWA3 439 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 RFPL3SP0C7P2 107 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 FAHP16930 419 aa5.05□□□□□ -1.6
PTPRD-206ENST00000397617 ST3GAL2Q16842 350 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms