RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 NPRL2Q8WTW4 380 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ASB13Q8WXK3 278 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 POFUT1Q9H488 388 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 KCNN3Q9UGI6 736 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 MGAT4AQ9UM21 535 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 PLEKHA6Q9Y2H5 1048 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 SHISA9B4DS77 424 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 RLN1P04808 185 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 CPT2P23786 658 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 DNASE1P24855 282 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 GLRXP35754 106 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 GK2Q14410 553 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-207ENST00000397200 MPPED2Q15777 294 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 RGS7BPQ6MZT1 257 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-207ENST00000397200 VHLLQ6RSH7 139 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 MUC20Q8N307 709 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-207ENST00000397200 OR2AK2Q8NG84 335 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 OR5D18Q8NGL1 313 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 GRPEL2Q8TAA5 225 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 ARHGAP5-AS1Q96IT6 56 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 Q96M66 194 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 OR2J1Q9GZK6 312 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 OPA3Q9H6K4 179 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 IL36GQ9NZH8 169 aa12.72□□□□□ -0.37
CAPN3-207ENST00000397200 HELZ2Q9BYK8 2649 aaKnown RBP12.72□□□□□ -0.37
CAPN3-207ENST00000397200 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 A6NNC1 897 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 AKR7A2O43488 359 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 OR4E1P0C645 316 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 COX6B1P14854 86 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-207ENST00000397200 HLXQ14774 488 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-207ENST00000397200 ZNF718Q3SXZ3 478 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 SP5Q6BEB4 398 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-207ENST00000397200 OR52W1Q6IF63 320 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 FBXW12Q6X9E4 464 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 OR51T1Q8NGJ9 327 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 OR2T35Q8NGX2 323 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 MARS2Q96GW9 593 aaKnown RBP12.71□□□□□ -0.37
CAPN3-207ENST00000397200 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 PECRQ9BY49 303 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 TMPRSS13Q9BYE2 586 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 VSIG4Q9Y279 399 aa12.71□□□□□ -0.37
CAPN3-207ENST00000397200 ZNF816-ZNF321PA0A0X1KG74 233 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 CEACAM18A8MTB9 384 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 SERPINE3A8MV23 424 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 GOSR1O95249 250 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 PLAUP00749 431 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 NRASP01111 189 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 SERPINA2P20848 420 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 GCH1P30793 250 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 HRH1P35367 487 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 RBP2P50120 134 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 DMRTC1Q5HYR2 192 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 PXT1Q8NFP0 134 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 KLF14Q8TD94 323 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-207ENST00000397200 TMEM171Q8WVE6 324 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 TMEM204Q9BSN7 226 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
CAPN3-207ENST00000397200 VSTM5A8MXK1 200 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 RAC2P15153 192 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 FABP6P51161 128 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 FUT6P51993 359 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 MTCP1P56278 107 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 PRSS12P56730 875 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 SNRPD2P62316 118 aaKnown RBP12.7□□□□□ -0.38
CAPN3-207ENST00000397200 MBNL2Q5VZF2 373 aaKnown RBP12.7□□□□□ -0.38
CAPN3-207ENST00000397200 FAHD2BQ6P2I3 314 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-207ENST00000397200 ZNF767PQ75MW2 155 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 SLC25A42Q86VD7 318 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 HOGA1Q86XE5 327 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 ARRDC1Q8N5I2 433 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 OR10K1Q8NGX5 313 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 FBXW5Q969U6 566 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 FAHD2AQ96GK7 314 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 S100A13Q99584 98 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 METTL9Q9H1A3 318 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
CAPN3-207ENST00000397200 SPTAN1Q13813 2472 aaKnown RBP12.69□□□□□ -0.38
CAPN3-207ENST00000397200 COL12A1Q99715 3063 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 RGS11O94810 467 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 MPV17P39210 176 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 NKPD1Q17RQ9 610 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 MICBQ29980 383 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 C2orf68Q2NKX9 166 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 ZNF672Q499Z4 452 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-207ENST00000397200 OR4K15Q8NH41 348 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 NEUROG1Q92886 237 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 BORCS8Q96FH0 119 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 POM121Q96HA1 1249 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 CYYR1Q96J86 154 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 OPN4Q9UHM6 478 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 HSF4Q9ULV5 492 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 FZR1Q9UM11 496 aa12.69□□□□□ -0.38
CAPN3-207ENST00000397200 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 ICE1Q9Y2F5 2266 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 OR2AT4A6NND4 320 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 E7EQL1 145 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms