RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 H3BN98 237 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 BUB1B-PAK6H3BSN5 160 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 MGST3O14880 152 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 ZNF254O75437 659 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 HAND1O96004 215 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 FAM106CPP0CH98 169 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 GABRR1P24046 479 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 ERP29P30040 261 aaKnown RBP11.79□□□□□ -0.52
SEC13-206ENST00000397102 HCCSP53701 268 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 ROM1Q03395 351 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 MFGE8Q08431 387 aaPredicted RBP11.79□□□□□ -0.52
SEC13-206ENST00000397102 HEPN1Q6WQI6 88 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 ZNF679Q8IYX0 411 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 OR8U1Q8NH10 309 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 TRMT10AQ8TBZ6 339 aaKnown RBP11.79□□□□□ -0.52
SEC13-206ENST00000397102 CDRT15Q96T59 188 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 NIPSNAP1Q9BPW8 284 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 YIPF3Q9GZM5 350 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 GAL3ST2Q9H3Q3 398 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
SEC13-206ENST00000397102 SMAD5-AS1Q9Y6J3 95 aa11.79□□□□□ -0.52
SEC13-206ENST00000397102 KIAA2026Q5HYC2 2103 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM172BPA6NC97 362 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A18PA6NE21 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A16PA6NEW6 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A20PA6NIJ5 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A9PA6NNJ1 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 DHRS7CA6NNS2 312 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A12PA8MX19 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A5PA8MXJ8 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 LY6LH3BQJ8 138 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 PSPNO60542 156 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A15PP0C7V4 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A13PP0C7W8 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A14PP0C7W9 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 FAM90A24PP0C7X0 464 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 CDK2P24941 298 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 RIDAP52758 137 aaKnown RBP11.78□□□□□ -0.52
SEC13-206ENST00000397102 P2RX3P56373 397 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 RPS7P62081 194 aaKnown RBP11.78□□□□□ -0.52
SEC13-206ENST00000397102 ZNF91Q05481 1191 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 Q6ZSR3 168 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 HDXQ7Z353 690 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 THNSL2Q86YJ6 484 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 EGFL6Q8IUX8 553 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 CPOQ8IVL8 374 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 ENTHD1Q8IYW4 607 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 C5orf56Q8N8D9 126 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 OR14K1Q8NGZ2 314 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 CADM1Q9BY67 442 aaKnown RBP11.78□□□□□ -0.52
SEC13-206ENST00000397102 MOB1AQ9H8S9 216 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 SCOCQ9UIL1 159 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 LINC00527Q9UJ94 153 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 SAMHD1Q9Y3Z3 626 aaKnown RBP11.78□□□□□ -0.52
SEC13-206ENST00000397102 U3KQV3 271 aa11.78□□□□□ -0.52
SEC13-206ENST00000397102 TRGV10A0A0A0MS01 117 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 FAM230AA0A1W2PPH8 454 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 A6NIN4 97 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 PRR32B1ATL7 298 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 SEC14L6B5MCN3 397 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 TOR1AO14656 332 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 FGF16O43320 207 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 E2F6O75461 281 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 SRSF10O75494 262 aaKnown RBP11.77□□□□□ -0.53
SEC13-206ENST00000397102 SLC2A5P22732 501 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 PRDX6P30041 224 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 PRRX1P54821 245 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 SLC35E3Q7Z769 313 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 SBSPONQ8IVN8 264 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 FOXRED2Q8IWF2 684 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 STPG2Q8N412 459 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 BBS1Q8NFJ9 593 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 OR10G2Q8NGC3 310 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 ASB17Q8WXJ9 295 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 EMG1Q92979 244 aaKnown RBP11.77□□□□□ -0.53
SEC13-206ENST00000397102 DCLRE1BQ9H816 532 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 REEP1Q9H902 201 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 TAS2R3Q9NYW6 316 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 IL36RNQ9UBH0 155 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 GLS2Q9UI32 602 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 SLC7A11Q9UPY5 501 aa11.77□□□□□ -0.53
SEC13-206ENST00000397102 A0A1B0GTI1 187 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 LOC110117498-PIK3R3F6TDL0 507 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 INMTO95050 263 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 IGHG2P01859 326 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 GDNFP39905 211 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 OR3A1P47881 315 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 KIR2DS1Q14954 304 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 DEFB136Q30KP8 78 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 OR2T5Q6IEZ7 315 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 TEX38Q6PEX7 206 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 Q8IYB0 196 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 ELMOD2Q8IZ81 293 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 OR2T29Q8NH02 315 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 CORO2AQ92828 525 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 PCDHB16Q9NRJ7 776 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 IKZF2Q9UKS7 526 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 GTF2A1LQ9UNN4 478 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms