RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PRAMEF5Q5TYX0 476 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 CCDC144NLQ6NUI1 221 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 TEX38Q6PEX7 206 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 HEPN1Q6WQI6 88 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 LCNL1Q6ZST4 164 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 ASRGL1Q7L266 308 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 OVCH2Q7RTZ1 564 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 KRT77Q7Z794 578 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 ANGPTL5Q86XS5 388 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 DRAM1Q8N682 238 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 RNF148Q8N7C7 305 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 RNF152Q8N8N0 203 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 CORO2AQ92828 525 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 PBOV1Q9GZY1 135 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 ZNF286AQ9HBT8 521 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 TMEM269A0A1B0GVZ9 245 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 CCRL2O00421 344 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 GMNNO75496 209 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 LY86O95711 162 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 IGHA1P01876 353 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 RPLP1P05386 114 aaKnown RBP6.6□□□□□ -1.35
SCFD1-202ENST00000396629 FRMD6-AS1P0C7T7 363 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 ALOX5APP20292 161 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 GDNFP39905 211 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 PSME3P61289 254 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 ESRRGP62508 458 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 FHL3Q13643 280 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 GRK1Q15835 563 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 SLX4IPQ5VYV7 408 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 DEGS2Q6QHC5 323 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 Q6ZSR3 168 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 SLC35E3Q7Z769 313 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 CEP19Q96LK0 163 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 TM2D3Q9BRN9 247 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 OR51V1Q9H2C8 321 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 TAS2R3Q9NYW6 316 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 MTCH1Q9NZJ7 389 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCFD1-202ENST00000396629 V9GYS6 101 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 TNFRSF11BO00300 401 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 MGST3O14880 152 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 PSPNO60542 156 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 SOX14O95416 240 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 CDK2P24941 298 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 PRRX1P54821 245 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 PNLIPRP3Q17RR3 467 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 COMMD2Q86X83 199 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 FOXRED2Q8IWF2 684 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 OTULINQ96BN8 352 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 ISOC1Q96CN7 298 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 DGCR6LQ9BY27 220 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 CHST6Q9GZX3 395 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 GAL3ST2Q9H3Q3 398 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 PCDHB16Q9NRJ7 776 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 TAS2R1Q9NYW7 299 aa6.6□□□□□ -1.35
SCFD1-202ENST00000396629 NUFIP1Q9UHK0 495 aaKnown RBP6.6□□□□□ -1.35
SCFD1-202ENST00000396629 A0A087X0M5 115 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 A0A1B0GX30 115 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 LINC01548A6NM66 108 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 HMGB1P1B2RPK0 211 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-202ENST00000396629 TOR1AO14656 332 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 CCNB2O95067 398 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 HAND1O96004 215 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 TTRP02766 147 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 HCKP08631 526 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 GABRR1P24046 479 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 VEGFCP49767 419 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 P2RX3P56373 397 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 ZNF91Q05481 1191 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 FOXE3Q13461 319 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 CXorf66Q5JRM2 361 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-202ENST00000396629 TRAPPC6BQ86SZ2 158 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 ENTHD1Q8IYW4 607 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 AQP11Q8NBQ7 271 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 OR14K1Q8NGZ2 314 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
SCFD1-202ENST00000396629 A0A1B0GTI1 187 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 FAM172BPA6NC97 362 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 ZNF254O75437 659 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 SRSF10O75494 262 aaKnown RBP6.59□□□□□ -1.36
SCFD1-202ENST00000396629 ELANEP08246 267 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 TMEM11P17152 192 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 OR3A1P47881 315 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 HCCSP53701 268 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 CBX1P83916 185 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 GPR50Q13585 617 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 LINC01559Q495D7 138 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 TRMT10AQ8TBZ6 339 aaKnown RBP6.59□□□□□ -1.36
SCFD1-202ENST00000396629 C4orf3Q8WVX3 66 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 SLAMF9Q96A28 289 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 MAGEL2Q9UJ55 1249 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 LAMP5Q9UJQ1 280 aa6.59□□□□□ -1.36
SCFD1-202ENST00000396629 IGKV1-27A0A075B6S5 117 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 TRGV10A0A0A0MS01 117 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 A0A1W2PPI3 338 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 DHRS7CA6NNS2 312 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 PRR32B1ATL7 298 aa6.58□□□□□ -1.36
SCFD1-202ENST00000396629 PRR23D1E9PI22 279 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-202ENST00000396629 AP4M1O00189 453 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms