RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 MUC22E2RYF6 1773 aaPredicted RBP7.48□□□□□ -1.21
NDE1-202ENST00000396355 NKX6-3A6NJ46 265 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 ZFPL1O95159 310 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 ZNF205O95201 554 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 CXCR1P25024 350 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 RUNX3Q13761 415 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 ELOBQ15370 118 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 CSRP2Q16527 193 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 ZNF750Q32MQ0 723 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 AMMECR1LQ6DCA0 310 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 FAM71E1Q6IPT2 247 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 ZNF770Q6IQ21 691 aaPredicted RBP7.48□□□□□ -1.21
NDE1-202ENST00000396355 PRSS54Q6PEW0 395 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 ARIH2OSQ8N7S6 290 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 OR1E3Q8WZA6 343 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 TMEM186Q96B77 213 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 SRSF8Q9BRL6 282 aaKnown RBP7.48□□□□□ -1.21
NDE1-202ENST00000396355 CST9LQ9H4G1 147 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 SLC17A5Q9NRA2 495 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 TIMM10BQ9Y5J6 103 aa7.48□□□□□ -1.21
NDE1-202ENST00000396355 MAP1LC3B2A6NCE7 125 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 EFSO43281 561 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 GSTZ1O43708 216 aaPredicted RBP7.47□□□□□ -1.21
NDE1-202ENST00000396355 CD99P14209 185 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 CRISP2P16562 243 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 UCP1P25874 307 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 SULT1A2P50226 295 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 FZD2Q14332 565 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 ZNF787Q6DD87 383 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 VWA1Q6PCB0 445 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 SFTPA1Q8IWL2 248 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 DEFB124Q8NES8 71 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 MAP1LC3BQ9GZQ8 125 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 SH3BGRL3Q9H299 93 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 BANF2Q9H503 90 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 TMEM38AQ9H6F2 299 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 G6PC2Q9NQR9 355 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 UQCR10Q9UDW1 63 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 OR4C45A6NMZ5 311 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 MSTNO14793 375 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 GPRIN2O60269 458 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 CDS2O95674 445 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 ONECUT2O95948 504 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 HBE1P02100 147 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 ZNF823P16415 610 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 GALP22466 123 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 OR4D11Q8NGI4 311 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 RTN4IP1Q8WWV3 396 aaPredicted RBP7.47□□□□□ -1.21
NDE1-202ENST00000396355 KLHDC3Q9BQ90 382 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 PARLQ9H300 379 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 RNF122Q9H9V4 155 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
NDE1-202ENST00000396355 UNC13CQ8NB66 2214 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 LOC100289279A0A1B0GTE1 492 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 TMEM269A0A1B0GVZ9 245 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 MKRN2OSH3BPM6 223 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 PLPP2O43688 288 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 CSNK2A2P19784 350 aaPredicted RBP7.47□□□□□ -1.21
NDE1-202ENST00000396355 SNU13P55769 128 aaKnown RBP7.47□□□□□ -1.21
NDE1-202ENST00000396355 DCDP81605 110 aaKnown RBP7.47□□□□□ -1.21
NDE1-202ENST00000396355 ASPHD2Q6ICH7 369 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 LYG1Q8N1E2 194 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 GBGT1Q8N5D6 347 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 BHLHE23Q8NDY6 225 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 NUP43Q8NFH3 380 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 OR1N2Q8NGR9 330 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 WDR34Q96EX3 536 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 ADOQ96SZ5 270 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 C1orf123Q9NWV4 160 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 APC2O95996 2303 aa7.47□□□□□ -1.21
NDE1-202ENST00000396355 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 SERTM2A0A1B0GWG4 89 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 SNAI2O43623 268 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 ARL4DP49703 201 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 CKS1BP61024 79 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 SHC2P98077 582 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 PMP22Q01453 160 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 PMPCAQ10713 525 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 ZNF77Q15935 545 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 TMEFF1Q8IYR6 380 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 OR51A4Q8NGJ6 313 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 ABHD5Q8WTS1 349 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 LHX4Q969G2 390 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 ZG16BQ96DA0 208 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 STRAPQ9Y3F4 350 aaKnown RBP7.46□□□□□ -1.21
NDE1-202ENST00000396355 WIPI2Q9Y4P8 454 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 OR1A2Q9Y585 309 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 PDE6DO43924 150 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 WDR1O75083 606 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 CTAG2O75638 210 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 WNT11O96014 354 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 RENP00797 406 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 CALCBP10092 127 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 SLC25A4P12235 298 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 RABIFP47224 123 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 RND3P61587 244 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 RPS18P62269 152 aaKnown RBP7.46□□□□□ -1.21
NDE1-202ENST00000396355 RBX1P62877 108 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 TMEM64Q6YI46 380 aa7.46□□□□□ -1.21
NDE1-202ENST00000396355 MOB1BQ7L9L4 216 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms