RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 RBM48Q5RL73 367 aaKnown RBP10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 ASPHD1Q5U4P2 390 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 SMARCD3Q6STE5 483 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 NDNFQ8TB73 568 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 ZNRF4Q8WWF5 429 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 CAPSLQ8WWF8 208 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 AQP3Q92482 292 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 RNF170Q96K19 258 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 HRASLS5Q96KN8 279 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 CNBD2Q96M20 576 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 FUZQ9BT04 418 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 COPS4Q9BT78 406 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 ABCB9Q9NP78 766 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 RASL12Q9NYN1 266 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 U3KQV3 271 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 TNCP24821 2201 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A18PA6NE21 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A16PA6NEW6 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A20PA6NIJ5 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A9PA6NNJ1 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A12PA8MX19 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A5PA8MXJ8 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 K7N7A8 449 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 SLC1A7O00341 560 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A15PP0C7V4 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A13PP0C7W8 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A14PP0C7W9 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM90A24PP0C7X0 464 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 SPNP16150 400 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 HTR1DP28221 377 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 DAPP51397 102 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 TIGD6Q17RP2 521 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 ZNF691Q5VV52 312 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 DCXRQ7Z4W1 244 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 TMEM179BQ7Z7N9 219 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 SATL1Q86VE3 508 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FBLIM1Q8WUP2 373 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 TRUB1Q8WWH5 349 aaKnown RBP10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 SLAMF6Q96DU3 332 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 RNFT2Q96EX2 444 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FEVQ99581 238 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 MRPS26Q9BYN8 205 aaKnown RBP10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 PRRG3Q9BZD7 231 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 FN3KQ9H479 309 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 DPM3Q9P2X0 92 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 LINC00527Q9UJ94 153 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 MOB4Q9Y3A3 225 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 N6AMT1Q9Y5N5 214 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 SIRT4Q9Y6E7 314 aaPredicted RBP10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 SESN1Q9Y6P5 492 aa10.66□□□□□ -0.7
VCPKMT-201ENST00000395859 TRBV4-1A0A0J9YWV2 114 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 MEX3AA1L020 520 aaKnown RBP10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 TBX1O43435 398 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 IDH3BO43837 385 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 RENP00797 406 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 IGLV1-47P01700 117 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 IGHG2P01859 326 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 GP9P14770 177 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 CFL1P23528 166 aaKnown RBP10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 SLC6A6P31641 620 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 MTNR1BP49286 362 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 GABARAPL2P60520 117 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 BDH1Q02338 343 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 SNAPC1Q16533 368 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM27D1Q5T7N8 215 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 RPL13AP3Q6NVV1 102 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 LYPD4Q6UWN0 246 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 ZNF429Q86V71 674 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 Q8N1Y9 231 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 STPG2Q8N412 459 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 DRAM1Q8N682 238 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 OR4K13Q8NH42 304 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 OR52J3Q8NH60 311 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 ERMAPQ96PL5 475 aaPredicted RBP10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 SPATA25Q9BR10 227 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 TEX12Q9BXU0 123 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM192AQ9GZU8 254 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 TMEM133Q9H2Q1 129 aa10.65□□□□□ -0.7
VCPKMT-201ENST00000395859 HSPG2P98160 4391 aa10.65□□□□□ -0.71
VCPKMT-201ENST00000395859 MUC4Q99102 2169 aa10.65□□□□□ -0.71
VCPKMT-201ENST00000395859 A0A087WXM4 84 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF878C9JN71 531 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF737O75373 536 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 DIRAS1O95057 198 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 IGHV4-30-4P0DP06 118 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 OSMP13725 252 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 CX3CR1P49238 355 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 GPM6AP51674 278 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 SLC35B1P78383 322 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 SMIM21Q3B7S5 101 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 TEX38Q6PEX7 206 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 KCTD8Q6ZWB6 473 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 FTMTQ8N4E7 242 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 C5orf56Q8N8D9 126 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 POC1AQ8NBT0 407 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 IL17DQ8TAD2 202 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF671Q8TAW3 534 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms