RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZSCAN4Q8NAM6 433 aaPredicted RBP13.75□□□□□ -0.21
SMARCD1-202ENST00000394963 SLC25A40Q8TBP6 338 aa13.75□□□□□ -0.21
SMARCD1-202ENST00000394963 ZNF503-AS2A6NEH8 195 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 DEFB108AA8MXU0 73 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 SULT1C2O00338 296 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 ZNF708P17019 499 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 RAB6AP20340 208 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 FOXF2Q12947 444 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 CLINT1Q14677 625 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 SWI5Q1ZZU3 235 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 CLEC18BQ6UXF7 455 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 CDH26Q8IXH8 852 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 PROCRQ9UNN8 238 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 SNRPGP15A8MWD9 76 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 F8VVB4 439 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 F8VWA3 439 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 RHBDL1O75783 438 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 TUSC2O75896 110 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 ZNF610Q8N9Z0 462 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 OR5AP2Q8NGF4 316 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 TMED6Q8WW62 240 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 SYT3Q9BQG1 590 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 TREM1Q9NP99 234 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 OR2Z1Q8NG97 314 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 HRH4Q9H3N8 390 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 MEMO1Q9Y316 297 aa13.74□□□□□ -0.21
SMARCD1-202ENST00000394963 IGKV1-27A0A075B6S5 117 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 A0A0U1RQV5 110 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 CYC1P08574 325 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 FUT3P21217 361 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 MPGP29372 298 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 VAMP2P63027 116 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 ZNF616Q08AN1 781 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 PRAMEF6Q5VXH4 476 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 AQP3Q92482 292 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 ADAT1Q9BUB4 502 aaKnown RBP13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 NECAP2Q9NVZ3 263 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 MED12LQ86YW9 2145 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 RCC1P18754 421 aaPredicted RBP13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 S100GP29377 79 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 PPP1CBP62140 327 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 ZBTB37Q5TC79 503 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 NOTCH2Q04721 2471 aa13.73□□□□□ -0.21
SMARCD1-202ENST00000394963 IGHV3-43A0A0B4J1X8 118 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 IGHV3-43DP0DP04 118 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 TMEM128Q5BJH2 165 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 C12orf4Q9NQ89 552 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 MAP1AP78559 2803 aaPredicted RBP13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 RAB32Q13637 225 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 TMEM185AQ8NFB2 350 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 OR13G1Q8NGZ3 307 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 ANGPTL6Q8NI99 470 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 NINJ1Q92982 152 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 HS3ST6Q96QI5 342 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 SUCNR1Q9BXA5 334 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 ANKHD1Q8IWZ3 2542 aaKnown RBP13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 SERPINE3A8MV23 424 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 MKRN2OSH3BPM6 223 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 AGTR1P30556 359 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 IL2RGP31785 369 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 ZNF133P52736 654 aaPredicted RBP13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 HSD17B11Q8NBQ5 300 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 TMEM231Q9H6L2 316 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 CRIM1Q9NZV1 1036 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 ANXA10Q9UJ72 324 aa13.72□□□□□ -0.21
SMARCD1-202ENST00000394963 IGKV1-12A0A0C4DH73 117 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 ZNF891A8MT65 544 aaPredicted RBP13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 ZNF705EA8MWA4 302 aaPredicted RBP13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 ERVH48-1M5A8F1 160 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 ACTL6AO96019 429 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 IGKV1D-12P01611 117 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 SERPINE2P07093 398 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 OR5AC1P0C628 307 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 FGL1Q08830 312 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 PDZD9Q8IXQ8 264 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 LHX6Q9UPM6 363 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 LINC01387J3KSC0 135 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 MPC2O95563 127 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 IL5P05113 134 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 TAS2R31P59538 309 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 ARL6IP1Q15041 203 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 RPS4Y2Q8TD47 263 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 HINT2Q9BX68 163 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 GSX2Q9BZM3 304 aa13.71□□□□□ -0.21
SMARCD1-202ENST00000394963 A0A1B0GW55 424 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 DNPH1O43598 174 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 LRP3O75074 770 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 IFNA2P01563 188 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 SCTP09683 121 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 DUX4L2P0CJ85 424 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 DUX4L3P0CJ86 424 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 DUX4L4P0CJ87 422 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 DUX4L5P0CJ88 424 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 DUX4L6P0CJ89 424 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 DUX4L7P0CJ90 424 aa13.71□□□□□ -0.22
SMARCD1-202ENST00000394963 PSMB6P28072 239 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms