RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DPM3Q9P2X0 92 aa16.84■□□□□ 0.29
TRAF4-203ENST00000394925 IL36RNQ9UBH0 155 aa16.84■□□□□ 0.29
TRAF4-203ENST00000394925 SNX5Q9Y5X3 404 aa16.84■□□□□ 0.29
TRAF4-203ENST00000394925 ACTR3P61158 418 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 UBE2V2Q15819 145 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 ODF4Q2M2E3 257 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 SLX4IPQ5VYV7 408 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 BAIAP2L2Q6UXY1 529 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 Q6ZSR3 168 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 SLC25A26Q70HW3 274 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 PIGWQ7Z7B1 504 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 DPF1Q92782 380 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 EMG1Q92979 244 aaKnown RBP16.83■□□□□ 0.28
TRAF4-203ENST00000394925 CCDC124Q96CT7 223 aaKnown RBP16.83■□□□□ 0.28
TRAF4-203ENST00000394925 PLEKHA1Q9HB21 404 aa16.83■□□□□ 0.28
TRAF4-203ENST00000394925 PSPNO60542 156 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 ANXA8P13928 327 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 DUSP1P28562 367 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 C9orf152Q5JTZ5 239 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 BCDIN3DQ7Z5W3 292 aaKnown RBP16.82■□□□□ 0.28
TRAF4-203ENST00000394925 SLC35F2Q8IXU6 374 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 ABHD12Q8N2K0 398 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 CANT1Q8WVQ1 401 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 ASB9Q96DX5 294 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 RBM14Q96PK6 669 aaKnown RBP16.82■□□□□ 0.28
TRAF4-203ENST00000394925 GPR61Q9BZJ8 451 aa16.82■□□□□ 0.28
TRAF4-203ENST00000394925 MRM2Q9UI43 246 aaKnown RBP16.82■□□□□ 0.28
TRAF4-203ENST00000394925 OR2F2O95006 317 aa16.81■□□□□ 0.28
TRAF4-203ENST00000394925 AMY1AP04745 511 aa16.81■□□□□ 0.28
TRAF4-203ENST00000394925 AMY2AP04746 511 aa16.81■□□□□ 0.28
TRAF4-203ENST00000394925 FUT6P51993 359 aa16.81■□□□□ 0.28
TRAF4-203ENST00000394925 PRAMEF5Q5TYX0 476 aa16.81■□□□□ 0.28
TRAF4-203ENST00000394925 MRPL41Q8IXM3 137 aaKnown RBP16.81■□□□□ 0.28
TRAF4-203ENST00000394925 NSL1Q96IY1 281 aa16.81■□□□□ 0.28
TRAF4-203ENST00000394925 ZNF649Q9BS31 505 aa16.81■□□□□ 0.28
TRAF4-203ENST00000394925 FAM172BPA6NC97 362 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 ZNF670-ZNF695F2Z2N8 137 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 MGST3O14880 152 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 PRKYO43930 277 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 RPP14O95059 124 aaKnown RBP16.8■□□□□ 0.28
TRAF4-203ENST00000394925 CCDC159P0C7I6 412 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 CALCBP10092 127 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 CCL1P22362 96 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 ARHGDIBP52566 201 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 CRISP1P54107 249 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 SNU13P55769 128 aaKnown RBP16.8■□□□□ 0.28
TRAF4-203ENST00000394925 BDH1Q02338 343 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 ZNF91Q05481 1191 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 MEPCEQ7L2J0 689 aaKnown RBP16.8■□□□□ 0.28
TRAF4-203ENST00000394925 ENTHD1Q8IYW4 607 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 ZNF596Q8TC21 504 aa16.8■□□□□ 0.28
TRAF4-203ENST00000394925 PAPOLBQ9NRJ5 636 aaKnown RBP16.8■□□□□ 0.28
TRAF4-203ENST00000394925 RBFOX1Q9NWB1 397 aaKnown RBP16.8■□□□□ 0.28
TRAF4-203ENST00000394925 UBE2J1Q9Y385 318 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-203ENST00000394925 LEUTXA8MZ59 168 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 GATBO75879 557 aaKnown RBP16.79■□□□□ 0.28
TRAF4-203ENST00000394925 CDK2P24941 298 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 NPBWR2P48146 333 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 P2RX3P56373 397 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 OR52W1Q6IF63 320 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 ETV3LQ6ZN32 361 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 RTN4RL2Q86UN3 420 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 OSR2Q8N2R0 312 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 OR51D1Q8NGF3 324 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 BORCS8Q96FH0 119 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 MNTQ99583 582 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 SEBOXQ9HB31 216 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-203ENST00000394925 ADGRL4Q9HBW9 690 aa16.79■□□□□ 0.28
TRAF4-203ENST00000394925 PSMB11A5LHX3 300 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 M0R129 80 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 SYT7O43581 403 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 BCL3P20749 454 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 ERP29P30040 261 aaKnown RBP16.78■□□□□ 0.28
TRAF4-203ENST00000394925 OR3A1P47881 315 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 Q8IYB0 196 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 FAM58AQ8N1B3 248 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 YIPF7Q8N8F6 280 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 GAL3ST2Q9H3Q3 398 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 CLN6Q9NWW5 311 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 H2AFY2Q9P0M6 372 aaPredicted RBP16.78■□□□□ 0.28
TRAF4-203ENST00000394925 HHLA2Q9UM44 414 aa16.78■□□□□ 0.28
TRAF4-203ENST00000394925 TRGV10A0A0A0MS01 117 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 SIRPB1O00241 398 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 IGLV1-47P01700 117 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 PRKACAP17612 351 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 GDNFP39905 211 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 PTGES3Q15185 160 aaKnown RBP16.77■□□□□ 0.28
TRAF4-203ENST00000394925 HEPN1Q6WQI6 88 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 SSX6Q7RTT6 188 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 ZNF329Q86UD4 541 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 CATSPERDQ86XM0 798 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 TBX5Q99593 518 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 CHST5Q9GZS9 411 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 ZNF286AQ9HBT8 521 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 GLS2Q9UI32 602 aa16.77■□□□□ 0.28
TRAF4-203ENST00000394925 TRBV2A0A0J9YWF9 115 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 AQP12BA6NM10 295 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 ENTPD6O75354 484 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 SERPINA3P01011 423 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 KRT8P05787 483 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms