RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CHATP28329 748 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 CD80P33681 288 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 CARD18P57730 90 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 HES3Q5TGS1 186 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 TMEM164Q5U3C3 297 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 SKA3Q8IX90 412 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 SVBPQ8N300 66 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 OR52M1Q8NGK5 317 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 C2CD4CQ8TF44 421 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 PIGCQ92535 297 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 NAA11Q9BSU3 229 aaPredicted RBP11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 HES7Q9BYE0 225 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 METTL9Q9H1A3 318 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 WNT5BQ9H1J7 359 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 TMEM38BQ9NVV0 291 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 LAMA5O15230 3695 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 DOCK7Q96N67 2140 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 CFAP47Q6ZTR5 3102 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 K7EPK0 472 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 SGPP2Q8IWX5 399 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 FAM71E2Q8N5Q1 922 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 SCGB3A2Q96PL1 93 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 C1orf123Q9NWV4 160 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 LRFN1Q9P244 771 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 IL36RNQ9UBH0 155 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 GHRLQ9UBU3 117 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 IL17BQ9UHF5 180 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 DEDDO75618 318 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 RPL35P42766 123 aaKnown RBP11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 TMEM268Q5VZI3 342 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 AAED1Q7RTV5 226 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 OR10D3Q8NH80 312 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 BORCS8Q96FH0 119 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 SMIM8Q96KF7 97 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 HSPB6O14558 160 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 VAMP5O95183 116 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 NRASP01111 189 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 SFTA3P0C7M3 94 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 EDN3P14138 238 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 FAM3AP98173 230 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 RAB35Q15286 201 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 TGIF1Q15583 401 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 IGSF11Q5DX21 431 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 Q6ZRG5 221 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 Q6ZSR3 168 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 CPEB3Q8NE35 698 aaKnown RBP11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 RTN4IP1Q8WWV3 396 aaPredicted RBP11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 SIGLEC12Q96PQ1 595 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 PRRX2Q99811 253 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 SH3BGRL3Q9H299 93 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 TMEM9BQ9NQ34 198 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 RCC2Q9P258 522 aaKnown RBP11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 ST3GAL6Q9Y274 331 aa11.65□□□□□ -0.54
GTF2F1-201ENST00000394456 A0A096LPE4 126 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 A0A1W2PPZ6 126 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 NME2P1O60361 137 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 TNFSF15O95150 251 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 CELA3AP09093 270 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 ZNF728P0DKX0 622 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 CCNOP22674 350 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 SRYQ05066 204 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 C10orf91Q5T1B1 145 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 NSUN5P2Q63ZY6 315 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 LINC00696Q6ZRV3 163 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 FGF23Q9GZV9 251 aaPredicted RBP11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 PLA2G3Q9NZ20 509 aa11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 CARHSP1Q9Y2V2 147 aaKnown RBP11.65□□□□□ -0.55
GTF2F1-201ENST00000394456 GJE1A6NN92 205 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 RNASEK-C17orf49H0YIS7 233 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 PVALBP20472 110 aaPredicted RBP11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 ITGA3P26006 1051 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 RBP2P50120 134 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 RAC3P60763 192 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 TMEM187Q14656 261 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 GPR137CQ8N3F9 429 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 OR6C6A6NF89 314 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 ZNF806P0C7X5 589 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 CAV2P51636 162 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 NHLH2Q02577 135 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 PLCXD3Q63HM9 321 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 BTNL8Q6UX41 500 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 MEX3BQ6ZN04 569 aaKnown RBP11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 SUMF1Q8NBK3 374 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 SECTM1Q8WVN6 248 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 FOXB1Q99853 325 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 OR2H1Q9GZK4 316 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 DNAJB11Q9UBS4 358 aa11.64□□□□□ -0.55
GTF2F1-201ENST00000394456 ZNF503-AS2A6NEH8 195 aa11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 RRP8O43159 456 aaKnown RBP11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 NXPH3O95157 252 aa11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 DUSP1P28562 367 aa11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 AKR1D1P51857 326 aa11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 FOXO1Q12778 655 aa11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 AKR1E2Q96JD6 320 aa11.63□□□□□ -0.55
GTF2F1-201ENST00000394456 TP53RKQ96S44 253 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms