RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 DAZLQ92904 295 aaKnown RBP16.49■□□□□ 0.23
HOXC6-202ENST00000394331 KLHDC3Q9BQ90 382 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 TPSD1Q9BZJ3 242 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 TBL1XR1Q9BZK7 514 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 LPAR2Q9HBW0 351 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 EHFQ9NZC4 300 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 GP1BBP13224 206 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 DEGS2Q6QHC5 323 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 COX15Q7KZN9 410 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 GALNTL5Q7Z4T8 443 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 KCNG3Q8TAE7 436 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 NEK7Q8TDX7 302 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 RTN4RQ9BZR6 473 aa16.49■□□□□ 0.23
HOXC6-202ENST00000394331 PRSS37A4D1T9 235 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 LMX1BO60663 402 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 RAD51DO75771 328 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 NUDT14O95848 222 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 ZNF43P17038 809 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 ARL4DP49703 201 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 RAC1P63000 192 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 DMRTA1Q5VZB9 504 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 MARCH3Q86UD3 253 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 HLA-CQ95604 372 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 SEMA5BQ9P283 1151 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 TRAV1-1A0A0B4J248 108 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 LOC102723971A0A1B0GUV8 181 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 METTL12A8MUP2 240 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 RRP8O43159 456 aaKnown RBP16.48■□□□□ 0.23
HOXC6-202ENST00000394331 TSPAN2O60636 221 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 KNG1P01042 644 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 CSNK1A1P48729 337 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 CEBPGP53567 150 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 SGCBQ16585 318 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 FAM90A2PQ658T7 463 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 POMZP3Q6PJE2 187 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 OGFOD3Q6PK18 319 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 SULF2Q8IWU5 870 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 TMEM170AQ8WVE7 144 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.48■□□□□ 0.23
HOXC6-202ENST00000394331 CHST11Q9NPF2 352 aa16.48■□□□□ 0.23
HOXC6-202ENST00000394331 LMO7DNF2Z398 122 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 PITX3O75364 302 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 POLR2HP52434 150 aaKnown RBP16.47■□□□□ 0.23
HOXC6-202ENST00000394331 TMEM50BP56557 158 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 PLCXD2Q0VAA5 305 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 DEFB133Q30KQ1 61 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 DEFB119Q8N690 84 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 URM1Q9BTM9 101 aaKnown RBP16.47■□□□□ 0.23
HOXC6-202ENST00000394331 PARD6AQ9NPB6 346 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 GPR173Q9NS66 373 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 POLR3KQ9Y2Y1 108 aaPredicted RBP16.47■□□□□ 0.23
HOXC6-202ENST00000394331 MED19A0JLT2 244 aaPredicted RBP16.47■□□□□ 0.23
HOXC6-202ENST00000394331 C11orf98E9PRG8 122 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 H3BMH7 237 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 SOCS1O15524 211 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 ATP6V0CP27449 155 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 BRS3P32247 399 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 CSNK2A1P68400 391 aaPredicted RBP16.47■□□□□ 0.23
HOXC6-202ENST00000394331 ZP2Q05996 745 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 CSNK2A3Q8NEV1 391 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 OR14L1PQ8NHC6 308 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 C1orf147Q96MC9 270 aaPredicted RBP16.47■□□□□ 0.23
HOXC6-202ENST00000394331 COPS7AQ9UBW8 275 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 HSF4Q9ULV5 492 aa16.47■□□□□ 0.23
HOXC6-202ENST00000394331 RANBP2P49792 3224 aaKnown RBP16.46■□□□□ 0.23
HOXC6-202ENST00000394331 ZNF732B4DXR9 585 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 IL6RP08887 468 aaPredicted RBP16.46■□□□□ 0.23
HOXC6-202ENST00000394331 OR10J1P30954 320 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 SNU13P55769 128 aaKnown RBP16.46■□□□□ 0.23
HOXC6-202ENST00000394331 RPL27P61353 136 aaKnown RBP16.46■□□□□ 0.23
HOXC6-202ENST00000394331 ZFP36L1Q07352 338 aaKnown RBP16.46■□□□□ 0.23
HOXC6-202ENST00000394331 ZNF519Q8TB69 540 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 SFTPDP35247 375 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 RBX1P62877 108 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 NSDHLQ15738 373 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 C1orf189Q5VU69 101 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 FBXL14Q8N1E6 418 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 OR5D14Q8NGL3 314 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 SDF2L1Q9HCN8 221 aa16.46■□□□□ 0.23
HOXC6-202ENST00000394331 A6NNC1 897 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 ST8SIA3O43173 380 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 HSPA12AO43301 675 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 CA11O75493 328 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 ZNF93P35789 620 aaPredicted RBP16.46■□□□□ 0.22
HOXC6-202ENST00000394331 RPL23AP62750 156 aaKnown RBP16.46■□□□□ 0.22
HOXC6-202ENST00000394331 RPP30P78346 268 aaKnown RBP16.46■□□□□ 0.22
HOXC6-202ENST00000394331 ACKR1Q16570 336 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 FAM185AQ8N0U4 392 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 HAS2Q92819 552 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 BOD1Q96IK1 185 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 C20orf144Q9BQM9 153 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 WWTR1Q9GZV5 400 aa16.46■□□□□ 0.22
HOXC6-202ENST00000394331 MPDZO75970 2070 aa16.45■□□□□ 0.22
HOXC6-202ENST00000394331 CEACAM1P13688 526 aa16.45■□□□□ 0.22
HOXC6-202ENST00000394331 FBLP22087 321 aaKnown RBP16.45■□□□□ 0.22
HOXC6-202ENST00000394331 EWSR1Q01844 656 aaKnown RBP eCLIP16.45■□□□□ 0.22
HOXC6-202ENST00000394331 TMEM241Q24JQ0 296 aa16.45■□□□□ 0.22
HOXC6-202ENST00000394331 ZFP62Q8NB50 900 aaPredicted RBP16.45■□□□□ 0.22
HOXC6-202ENST00000394331 GNPNAT1Q96EK6 184 aaPredicted RBP16.45■□□□□ 0.22
HOXC6-202ENST00000394331 FAAP24Q9BTP7 215 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms