RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 GSG1LQ6UXU4 331 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 UNQ6126/PRO20091Q6UXV3 157 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 OVCH2Q7RTZ1 564 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 BOLLQ8N9W6 283 aaKnown RBP9.58□□□□□ -0.88
TCOF1-203ENST00000394269 GALNT11Q8NCW6 608 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 MITD1Q8WV92 249 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 HPSE2Q8WWQ2 592 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 TRAF4Q9BUZ4 470 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-203ENST00000394269 TM2D1Q9BX74 207 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF471Q9BX82 626 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-203ENST00000394269 ZC4H2Q9NQZ6 224 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 KIAA1549Q9HCM3 1950 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 GRPP07492 148 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ALDH3B1P43353 468 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 HOXA4Q00056 320 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 NHLH1Q02575 133 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 SMUG1Q53HV7 270 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 FAM74A1Q5RGS3 127 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 MKXQ8IYA7 352 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 MARS2Q96GW9 593 aaKnown RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 RTBDNQ9BSG5 229 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 RNF122Q9H9V4 155 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 MBD2Q9UBB5 411 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 SH3BGRL2Q9UJC5 107 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF391Q9UJN7 358 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 KCNMB2Q9Y691 235 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 HEATR1Q9H583 2144 aaKnown RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ADGRG4Q8IZF6 3080 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 TRAV14DV4A0A0A6YYC5 116 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 RPL36A-HNRNPH2H7BZ11 118 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 TM4SF5O14894 197 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 SCGB1D2O95969 90 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 IGHV1-2P23083 117 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ANKRD55Q3KP44 614 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ALKBH6Q3KRA9 238 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ACTBL2Q562R1 376 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 SPIN3Q5JUX0 258 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 VAX1Q5SQQ9 334 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 TMEM42Q69YG0 159 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ZADH2Q8N4Q0 377 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 NANOS1Q8WY41 292 aaKnown RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 TMEM230Q96A57 120 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 FGF23Q9GZV9 251 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 MTCH1Q9NZJ7 389 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 I3L521 148 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 RHBDL1O75783 438 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 DUS4LO95620 317 aaKnown RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 FCGR3AP08637 254 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 ZNF44P15621 663 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 CHATP28329 748 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 FABP6P51161 128 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 IGSF11Q5DX21 431 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 FAM214BQ7L5A3 538 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 PEG10Q86TG7 708 aaKnown RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 C9orf106Q8NAJ2 232 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 INO80EQ8NBZ0 244 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 CCDC54Q8NEL0 328 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 DCUN1D4Q92564 292 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 BCL2L2Q92843 193 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 TAAR6Q96RI8 345 aa9.57□□□□□ -0.88
TCOF1-203ENST00000394269 VRK1Q99986 396 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-203ENST00000394269 RFPL4AA6NLU0 287 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 RFPL4AL1F8VTS6 287 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 K7EM74 188 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 PDCD6O75340 191 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 SCO1O75880 301 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 FUT3P21217 361 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 EIF2S3P41091 472 aaKnown RBP9.56□□□□□ -0.88
TCOF1-203ENST00000394269 RBM11P57052 281 aaKnown RBP9.56□□□□□ -0.88
TCOF1-203ENST00000394269 ARL6IP1Q15041 203 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 TBC1D28Q2M2D7 210 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 OR5L1Q8NGL2 311 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 C17orf50Q8WW18 174 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 EXTL1Q92935 676 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 GMPPAQ96IJ6 420 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-203ENST00000394269 SCGB3A2Q96PL1 93 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 NUDT16L1Q9BRJ7 211 aaKnown RBP9.56□□□□□ -0.88
TCOF1-203ENST00000394269 LIME1Q9H400 295 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 DLL3Q9NYJ7 618 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 LEUTXA8MZ59 168 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 F5H0A9 414 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-203ENST00000394269 OR1J1Q8NGS3 322 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 IL1F10Q8WWZ1 152 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 GSX2Q9BZM3 304 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 CALCRP30988 508 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-203ENST00000394269 PIGPP57054 158 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 TAS2R31P59538 309 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 CEACAM21Q3KPI0 293 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 C11orf87Q6NUJ2 197 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 COLCA1Q6ZS62 124 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 COMMD7Q86VX2 200 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 SLC38A6Q8IZM9 456 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 SARAFQ96BY9 339 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 OPN3Q9H1Y3 402 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-203ENST00000394269 OR2S2Q9NQN1 319 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 PCDHB16Q9NRJ7 776 aa9.56□□□□□ -0.88
TCOF1-203ENST00000394269 KANTRA0A1W2PQU2 76 aa9.55□□□□□ -0.88
TCOF1-203ENST00000394269 FOXI3A8MTJ6 420 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms