RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 HPXP02790 462 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 GABRA1P14867 456 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 ORM2P19652 201 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 EVX2Q03828 476 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 SLC25A26Q70HW3 274 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 MRGPRGQ86SM5 289 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 VSTM2AQ8TAG5 236 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 AKIP1Q9NQ31 210 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 PLSCR3Q9NRY6 295 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.05□□□□□ -0.48
USP49-203ENST00000394253 CDS2O95674 445 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 FUT3P21217 361 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 Q7L0L9 218 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 TRMT61AQ96FX7 289 aaKnown RBP12.05□□□□□ -0.48
USP49-203ENST00000394253 ANAPC13Q9BS18 74 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 C1QTNF6Q9BXI9 259 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 TWSG1Q9GZX9 223 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 K7ESF4 209 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 LYZP61626 148 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 YPEL5P62699 121 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 FABP5Q01469 135 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 LIAT1Q6ZQX7 453 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 NPEPL1Q8NDH3 523 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 GABRG3Q99928 467 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 CES1P1Q9UKY3 287 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 PRSS37A4D1T9 235 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 MBLAC1A4D2B0 266 aaPredicted RBP12.05□□□□□ -0.48
USP49-203ENST00000394253 SLC25A17O43808 307 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 AKR7A3O95154 331 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 Q5PR19 223 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 ROBO4Q8WZ75 1007 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 TLCD2A6NGC4 264 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 FOLR2P14207 255 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 LINC00303Q3SY05 128 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 TINAGL1Q9GZM7 467 aaPredicted RBP12.05□□□□□ -0.48
USP49-203ENST00000394253 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 ARG1P05089 322 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 ZNF121P58317 390 aaPredicted RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 ISL1P61371 349 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 ELAVL1Q15717 326 aaKnown RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 CCDC190Q86UF4 302 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 GMPPAQ96IJ6 420 aaPredicted RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 PTPRQQ9UMZ3 2332 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 FAM109BQ6ICB4 259 aaPredicted RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 MOGAT3Q86VF5 341 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 LILRA2Q8N149 483 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 UBTD2Q8WUN7 234 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 PRRG2O14669 202 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 SRSF10O75494 262 aaKnown RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 CEACAM3P40198 252 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 LINC00469Q8N7U9 141 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 CEACAM6P40199 344 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 DYNLT3P51808 116 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 COX20Q5RI15 118 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 APOBEC3DQ96AK3 386 aaPredicted RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 CD70P32970 193 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 CDK5R1Q15078 307 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 RTL10Q7L3V2 364 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 ZC3H3Q8IXZ2 948 aaKnown RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 CYSLTR2Q9NS75 346 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 HLA-DQA1P01909 254 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 ZNF865P0CJ78 1059 aaPredicted RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 AUNIPQ9H7T9 357 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 C9orf170A2RU37 121 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 CD68P34810 354 aaPredicted RBP12.04□□□□□ -0.48
USP49-203ENST00000394253 SELENBP1Q13228 472 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 DEFB133Q30KQ1 61 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 OR4S2Q8NH73 311 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 SPSB1Q96BD6 273 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 IL17CQ9P0M4 197 aa12.04□□□□□ -0.48
USP49-203ENST00000394253 CD38P28907 300 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 RRN3P1Q2M238 152 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 ATOH8Q96SQ7 321 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 KLK11Q9UBX7 282 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 NEURL4Q96JN8 1562 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 TJP1Q07157 1748 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 FAM53AQ6NSI3 398 aaPredicted RBP12.03□□□□□ -0.48
USP49-203ENST00000394253 ZNF665Q9H7R5 613 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 KCNK7Q9Y2U2 307 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 DOCK2Q92608 1830 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 ZNF735P0CB33 412 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 SMIM18P0DKX4 95 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 ID1P41134 155 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 MEF2CQ06413 473 aaPredicted RBP12.03□□□□□ -0.48
USP49-203ENST00000394253 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 OR10AG1Q8NH19 301 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 M0R082 166 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 OR5AC1P0C628 307 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 PTGER1P34995 402 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 MICBQ29980 383 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 PELI3Q8N2H9 469 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 OR1N1Q8NGS0 311 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 OR2V2Q96R30 315 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 OR51M1Q9H341 326 aa12.03□□□□□ -0.48
USP49-203ENST00000394253 WNT16Q9UBV4 365 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms