RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 AWAT1Q58HT5 328 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 AAED1Q7RTV5 226 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 GPR137CQ8N3F9 429 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 IP6K3Q96PC2 410 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 BCO1Q9HAY6 547 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 KLF7O75840 302 aaPredicted RBP12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 F10P00742 488 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 AADACP22760 399 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 SNCAP37840 140 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 Q6ZPA2 131 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 LHFPL2Q6ZUX7 228 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 INTS12Q96CB8 462 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 GPHA2Q96T91 129 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 RGCCQ9H4X1 137 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 WDR54Q9H977 334 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF286AQ9HBT8 521 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 KPTNQ9Y664 436 aa12.08□□□□□ -0.48
GAPVD1-205ENST00000394084 NSG1A0A0A6YYJ2 146 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 GPR137BO60478 399 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 CBR3O75828 277 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 OR7C1O76099 320 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 FGF5P12034 268 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 SUCLG1P53597 346 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 CARD18P57730 90 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 CEACAM16Q2WEN9 425 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 GALNT14Q96FL9 552 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 FBXO7Q9Y3I1 522 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 FREM2Q5SZK8 3169 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 H7C1Q1 480 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 SLC33A1O00400 549 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 TRAPPC6AO75865 159 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 CFIP05156 583 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 DUSP1P28562 367 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 RAB5BP61020 215 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 HERV-K104P61576 105 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 EXT1Q16394 746 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 IGSF11Q5DX21 431 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 TMEM182Q6ZP80 229 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 CALHM1Q8IU99 346 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 SKA3Q8IX90 412 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 MSI2Q96DH6 328 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 C18orf12Q96KH6 178 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 TP53RKQ96S44 253 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF700Q9H0M5 742 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 C19orf12Q9NSK7 152 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 STARD10Q9Y365 291 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 TIMM10BQ9Y5J6 103 aa12.07□□□□□ -0.48
GAPVD1-205ENST00000394084 C9J4A7 227 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 CST2P09228 141 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 RFPL3SP0C7P2 107 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 DANCRP0C864 163 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 GLP1RP43220 463 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 NPBWR2P48146 333 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 CLINT1Q14677 625 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 KRBOX4Q5JUW0 171 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 LGI3Q8N145 548 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 CCDC54Q8NEL0 328 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 DMBX1Q8NFW5 382 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 HIST1H2BAQ96A08 127 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 SUCNR1Q9BXA5 334 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 LUZP4Q9P127 313 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 WNT16Q9UBV4 365 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 SLC7A11Q9UPY5 501 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 C7orf77A4D0Y5 90 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF587BE7ETH6 402 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 ST8SIA3O43173 380 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF44P15621 663 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 P2RY1P47900 373 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 MEOX2P50222 304 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 RAC3P60763 192 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 MALLQ13021 153 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 LYPD6BQ8NI32 183 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 FOXB1Q99853 325 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 USB1Q9BQ65 265 aaKnown RBP12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 POMT1Q9Y6A1 747 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 A6NLC8 198 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 TERTO14746 1132 aaKnown RBP12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 EIF3GO75821 320 aaKnown RBP eCLIP12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 SEC11BP0C7V7 166 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 OMGP23515 440 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 ITGA3P26006 1051 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 RPS18P62269 152 aaKnown RBP12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 SLC25A26Q70HW3 274 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 AGBL5Q8NDL9 886 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 WNT5BQ9H1J7 359 aa12.06□□□□□ -0.48
GAPVD1-205ENST00000394084 CCDC163A0A0D9SF12 145 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 A0A1W2PPH5 198 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 OR6C6A6NF89 314 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 FAM24AA6NFZ4 105 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 PDCD6O75340 191 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 TCN2P20062 427 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 CCNOP22674 350 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 PPP1CCP36873 323 aaKnown RBP12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 MLF1P58340 268 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 B3GALT5-AS1P59052 145 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms