RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ZNF100Q8IYN0 542 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 LGI3Q8N145 548 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 NAXEQ8NCW5 288 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 CLCC1Q96S66 551 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 ST3GAL6Q9Y274 331 aa16.32■□□□□ 0.2
CBX1-202ENST00000393408 hCG_38984A0A1B0GV85 526 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 IFNA4P05014 189 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 GLI4P10075 376 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 IL13RA2Q14627 380 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 HLA-BQ31612 363 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 OR11L1Q8NGX0 322 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 SFT2D1Q8WV19 159 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 HPSE2Q8WWQ2 592 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 C14orf79Q96F83 325 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 ALKBH3Q96Q83 286 aaPredicted RBP16.31■□□□□ 0.2
CBX1-202ENST00000393408 LUZP4Q9P127 313 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 ZNF716A6NP11 495 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 PSG4Q00888 419 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 ZNF616Q08AN1 781 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 GUK1Q16774 197 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 AKIRIN2Q53H80 203 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 FBXW12Q6X9E4 464 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 AGBL5Q8NDL9 886 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 IFI44Q8TCB0 444 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 SYT3Q9BQG1 590 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 RSRP1Q9BUV0 290 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 ZNF391Q9UJN7 358 aa16.31■□□□□ 0.2
CBX1-202ENST00000393408 NCKAP5O14513 1909 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 PDCD6O75340 191 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 AKR1C3P42330 323 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 FUT6P51993 359 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 GGNQ86UU5 652 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 WNT5BQ9H1J7 359 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 A0A0G2JMM0 328 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 A0A1W2PPB8 328 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 A0A1W2PRS3 328 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 CCDC85CA6NKD9 419 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 KIR3DP1A8MWS1 328 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 C9J4A7 227 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 ST8SIA3O43173 380 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 LMO1P25800 156 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 CAMLGP49069 296 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 FHITP49789 147 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 ZNF92Q03936 586 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 YRDCQ86U90 279 aaKnown RBP16.3■□□□□ 0.2
CBX1-202ENST00000393408 KDF1Q8NAX2 398 aaPredicted RBP16.3■□□□□ 0.2
CBX1-202ENST00000393408 HIST1H2BAQ96A08 127 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 OR2H1Q9GZK4 316 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 RGCCQ9H4X1 137 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 RPS10P5Q9NQ39 176 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 C19orf12Q9NSK7 152 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 SHANK1Q9Y566 2161 aa16.3■□□□□ 0.2
CBX1-202ENST00000393408 TCN2P20062 427 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 AADACP22760 399 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 SRD5A2P31213 254 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 CARD18P57730 90 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 RAB5BP61020 215 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 MALLQ13021 153 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 AAED1Q7RTV5 226 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 OR2Y1Q8NGV0 311 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 FGFBP3Q8TAT2 258 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 SH3BGRL3Q9H299 93 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 FBXO9Q9UK97 447 aaPredicted RBP16.29■□□□□ 0.2
CBX1-202ENST00000393408 SLC7A11Q9UPY5 501 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 RCL1Q9Y2P8 373 aaKnown RBP16.29■□□□□ 0.2
CBX1-202ENST00000393408 NSG1A0A0A6YYJ2 146 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 PHF1O43189 567 aaPredicted RBP16.29■□□□□ 0.2
CBX1-202ENST00000393408 PTAFRP25105 342 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 GLP1RP43220 463 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 MEOX2P50222 304 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 RBM11P57052 281 aaKnown RBP16.29■□□□□ 0.2
CBX1-202ENST00000393408 NHLH2Q02577 135 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 PDCD1Q15116 288 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 OR8B8Q15620 311 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 AWAT1Q58HT5 328 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 TMEM211Q6ICI0 200 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 CCDC71LQ8N9Z2 235 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 OR4D5Q8NGN0 318 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 FOXB1Q99853 325 aa16.29■□□□□ 0.2
CBX1-202ENST00000393408 STRAPQ9Y3F4 350 aaKnown RBP16.29■□□□□ 0.2
CBX1-202ENST00000393408 CNTRLQ7Z7A1 2325 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 C1QL1O75973 258 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 GLAP06280 429 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 RAB5CP51148 216 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 HERV-K104P61576 105 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 DAZAP2Q15038 168 aaPredicted RBP16.28■□□□□ 0.2
CBX1-202ENST00000393408 PLCXD3Q63HM9 321 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 KCNE4Q8WWG9 221 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 TP53RKQ96S44 253 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 TMED3Q9Y3Q3 217 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 TNRC6BQ9UPQ9 1833 aaKnown RBP16.28■□□□□ 0.2
CBX1-202ENST00000393408 CCL4P13236 92 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 RGS19P49795 217 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 CEACAM16Q2WEN9 425 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 SLC35G3Q8N808 338 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 OR14L1PQ8NHC6 308 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 PIGCQ92535 297 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 SPACA1Q9HBV2 294 aa16.28■□□□□ 0.2
CBX1-202ENST00000393408 C7orf77A4D0Y5 90 aa16.27■□□□□ 0.2
CBX1-202ENST00000393408 CXCL13O43927 109 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms