RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 ALKBH7Q9BT30 221 aaPredicted RBP13.21□□□□□ -0.29
CCDC50-201ENST00000392455 PRRX2Q99811 253 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 JKAMPQ9P055 326 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 ZBTB42B2RXF5 422 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 ZNF253O75346 499 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 HBZP02008 142 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 CGB2Q6NT52 195 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 WFDC8Q8IUA0 241 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 DUSP18Q8NEJ0 188 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 OR1B1Q8NGR6 318 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 OR51E1Q8TCB6 317 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 RDH5Q92781 318 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 PIK3IP1Q96FE7 263 aa13.21□□□□□ -0.29
CCDC50-201ENST00000392455 CBR3O75828 277 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 RECKO95980 971 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 GPX2P18283 190 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 KCNMB1Q16558 191 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 PRR14Q9BWN1 585 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 SMCHD1A6NHR9 2005 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 M0R082 166 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 INHBBP09529 407 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 OR52N5Q8NH56 324 aa13.21□□□□□ -0.3
CCDC50-201ENST00000392455 ARFGEF3Q5TH69 2177 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 OR5B21A6NL26 309 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 CCDC144NLQ6NUI1 221 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF740Q8NDX6 193 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 VAX2Q9UIW0 290 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 RPS20P60866 119 aaKnown RBP13.2□□□□□ -0.3
CCDC50-201ENST00000392455 PMP22Q01453 160 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 LINC00596Q86U02 117 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 NFAM1Q8NET5 270 aaPredicted RBP13.2□□□□□ -0.3
CCDC50-201ENST00000392455 OR2W1Q9Y3N9 320 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 LOC107984156A0A0G2JMH3 177 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 CAMPP49913 170 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 SLC25A26Q70HW3 274 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 Q7L0L9 218 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 ARL17AQ8IVW1 177 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 RAB1CQ92928 201 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 ZBP1Q9H171 429 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 RBFOX3A6NFN3 312 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 MED12Q93074 2177 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 FITM1A5D6W6 292 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 OR4C46A6NHA9 309 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 GNG7O60262 68 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF324O75467 553 aaPredicted RBP13.2□□□□□ -0.3
CCDC50-201ENST00000392455 ATF1P18846 271 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 TMEM108Q6UXF1 575 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 STPG2Q8N412 459 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 OR5C1Q8NGR4 320 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 WDR34Q96EX3 536 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 SRD5A3Q9H8P0 318 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF107Q9UII5 783 aaPredicted RBP13.2□□□□□ -0.3
CCDC50-201ENST00000392455 SOCS7O14512 581 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 PFN3P60673 137 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 C20orf196Q8IYI0 205 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 NRSN2Q9GZP1 204 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 TRAPPC4Q9Y296 219 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 PPIL1Q9Y3C6 166 aa13.2□□□□□ -0.3
CCDC50-201ENST00000392455 GLDNQ6ZMI3 551 aaPredicted RBP13.19□□□□□ -0.3
CCDC50-201ENST00000392455 LIAT1Q6ZQX7 453 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 TMEM136Q6ZRR5 245 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 DEFB127Q9H1M4 99 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 A0A1W2PS18 150 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 B3GALT4O96024 378 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 OPRM1P35372 400 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 SURF2Q15527 256 aaPredicted RBP13.19□□□□□ -0.3
CCDC50-201ENST00000392455 SPANXN1Q5VSR9 72 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 SAXO2Q658L1 398 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 PRSS42Q7Z5A4 293 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 MYO5AQ9Y4I1 1855 aaKnown RBP13.19□□□□□ -0.3
CCDC50-201ENST00000392455 COMPP49747 757 aaPredicted RBP13.19□□□□□ -0.3
CCDC50-201ENST00000392455 RAC3P60763 192 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 ROBO4Q8WZ75 1007 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 SPANXA1Q9NS26 97 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 K7ESM1 405 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 DSCR4P56555 118 aaPredicted RBP13.19□□□□□ -0.3
CCDC50-201ENST00000392455 HLA-DRB3P79483 266 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF511Q8NB15 262 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 Q96M85 177 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 OR2V2Q96R30 315 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 C11orf94C9JXX5 98 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 MLF1P58340 268 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 HERPUD1Q15011 391 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 OR10G4Q8NGN3 311 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 OR10G9Q8NGN4 311 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 OR10G7Q8NGN6 311 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 MRPL30Q8TCC3 161 aaKnown RBP13.19□□□□□ -0.3
CCDC50-201ENST00000392455 WDR89Q96FK6 387 aaPredicted RBP13.19□□□□□ -0.3
CCDC50-201ENST00000392455 F11P03951 625 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 COL19A1Q14993 1142 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 BSXQ3C1V8 233 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 ZG16BQ96DA0 208 aa13.19□□□□□ -0.3
CCDC50-201ENST00000392455 SLC17A2O00624 439 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 WNT9BO14905 357 aa13.18□□□□□ -0.3
CCDC50-201ENST00000392455 PCSK6P29122 969 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms