RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 SLC31A1O15431 190 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 SLC37A4O43826 429 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 GMDSO60547 372 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 ALOX12BO75342 701 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 PSIP1O75475 530 aaKnown RBP0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 DHRS3O75911 302 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 SNAI1O95863 264 aaPredicted RBP0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 IGHV3-53P01767 116 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 HLA-AP01891 365 aaKnown RBP0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 TRGV3P03979 118 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 LIPCP11150 499 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF708P17019 499 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 CD9P21926 228 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 HTR2CP28335 458 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 GPR4P46093 362 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 BNIP2Q12982 314 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 GPR176Q14439 515 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 TAL2Q16559 108 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 KRTAP25-1Q3LHN0 102 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF404Q494X3 552 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 UGT2A3Q6UWM9 527 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 LINC00596Q86U02 117 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR6N2Q8NGY6 317 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR8S1Q8NH09 359 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 MUC7Q8TAX7 377 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 C22orf15Q8WYQ4 148 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR5P3Q8WZ94 311 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 TOP1MTQ969P6 601 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 APOBEC3DQ96AK3 386 aaPredicted RBP0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 FAM131CQ96AQ9 280 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 FXYD5Q96DB9 178 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 YPEL4Q96NS1 127 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 QKIQ96PU8 341 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 STACQ99469 402 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 VAT1Q99536 393 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 GAL3ST2Q9H3Q3 398 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 PRORYQ9H606 182 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 TDRD3Q9H7E2 651 aaKnown RBP0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 SDHAF3Q9NRP4 125 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 ANXA10Q9UJ72 324 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 V9GYY9 64 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 LTBP2Q14767 1821 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 SVILO95425 2214 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 CEP170Q5SW79 1584 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 TRAV8-7A0A075B6U6 113 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 IGHV3-21A0A0B4J1V1 117 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 IGHV3-43A0A0B4J1X8 118 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 A0A0B4J2C4 111 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 A0A0J9YYE9 177 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 MYBPHLA2RUH7 354 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF729A6NN14 1252 aaPredicted RBP0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 A8MWP4 228 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 C3orf84H3BNL1 204 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF593O00488 134 aaPredicted RBP0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 GYG2O15488 501 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 DEDDO75618 318 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 CDS2O95674 445 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 IGKV1D-33P01593 117 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 IGKV1-33P01594 117 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 TRBC1P01850 177 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 RLN2P04090 185 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 CRYGCP07315 174 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 STAG3L2P0CL84 134 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 SCGB1C2P0DMR2 95 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 CRABP2P29373 138 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 FUSP35637 526 aaKnown RBP eCLIP0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 LGALS7P47929 136 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 XKP51811 444 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 CCL23P55773 120 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 DHRS2Q13268 280 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 DYNC1I2Q13409 638 aaKnown RBP0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 STK38Q15208 465 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 NDUFAF6Q330K2 333 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 LGALSLQ3ZCW2 172 aaPredicted RBP0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 NKAIN1Q4KMZ8 207 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 UBE2NLQ5JXB2 153 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 GLYATQ6IB77 296 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 C16orf87Q6PH81 154 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF773Q6PK81 442 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 ASCL4Q6XD76 172 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 CYHR1Q6ZMK1 362 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZFP82Q8N141 532 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF738Q8NE65 137 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR6K2Q8NGY2 324 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR51Q1Q8NH59 317 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 SCGB1C1Q8TD33 95 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 BLNKQ8WV28 456 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 TNFRSF14Q92956 283 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 SLC25A44Q96H78 314 aaPredicted RBP0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 PYURFQ96I23 114 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 TRIB3Q96RU7 358 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 HIGD2AQ9BW72 106 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 CHID1Q9BWS9 393 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 SHCBP1LQ9BZQ2 653 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 GABARAPL1Q9H0R8 117 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 PORCNQ9H237 461 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 SYT4Q9H2B2 425 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 TXNIPQ9H3M7 391 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 PLEKHA1Q9HB21 404 aa0.7□□□□□ -2.3
RNU6-440P-201ENST00000390882 VCX3AQ9NNX9 186 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms