RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 ZNF84P51523 738 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 NCMAPQ5T1S8 102 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 TMEM217Q8N7C4 229 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 SLC35G3Q8N808 338 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 C15orf54Q8N8G6 183 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 ADPRHL1Q8NDY3 354 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 LUZP4Q9P127 313 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 STARD10Q9Y365 291 aa18.21■□□□□ 0.51
COL23A1-201ENST00000390654 TNFSF12O43508 249 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 GAPDHP04406 335 aaKnown RBP18.2■□□□□ 0.5
COL23A1-201ENST00000390654 S100A9P06702 114 aaKnown RBP18.2■□□□□ 0.5
COL23A1-201ENST00000390654 DANCRP0C864 163 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 ALDH3B1P43353 468 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 C9orf135Q5VTT2 229 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 KCNJ16Q9NPI9 418 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 SEMA5BQ9P283 1151 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 PATE3B3GLJ2 98 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 TP53I11O14683 189 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 FBP1P09467 338 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 CCNOP22674 350 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 EIF1P41567 113 aaKnown RBP18.2■□□□□ 0.5
COL23A1-201ENST00000390654 POLR2GP62487 172 aaKnown RBP eCLIP18.2■□□□□ 0.5
COL23A1-201ENST00000390654 H3F3AP84243 136 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 MAML2Q8IZL2 1156 aaPredicted RBP18.2■□□□□ 0.5
COL23A1-201ENST00000390654 FGFBP3Q8TAT2 258 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 RNF138Q8WVD3 245 aa18.2■□□□□ 0.5
COL23A1-201ENST00000390654 TRAV20A0A0B4J274 112 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 IFNA4P05014 189 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 AADACP22760 399 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 HTR5AP47898 357 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 ZNF133P52736 654 aaPredicted RBP18.19■□□□□ 0.5
COL23A1-201ENST00000390654 Q6ZPA2 131 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 FADS6Q8N9I5 356 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 ZIC4Q8N9L1 334 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 PLEKHA2Q9HB19 425 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 TRBV23-1A0A0A0MS06 115 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 NSG1A0A0A6YYJ2 146 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 ZNF32P17041 273 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 RBP2P50120 134 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 SULT1A1P50225 295 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 MMP24Q9Y5R2 645 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 FREM1Q5H8C1 2179 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 IGLV3-32A0A0A0MS00 114 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 C5orf52A6NGY3 159 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 ZNF727A8MUV8 499 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 CST7O76096 145 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 NPBWR2P48146 333 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 TMEM123Q8N131 208 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 CARFQ8N187 725 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 ZNF565Q8N9K5 539 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 URGCP-MRPS24S4R325 110 aa18.19■□□□□ 0.5
COL23A1-201ENST00000390654 NKX2-6A6NCS4 301 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 ZIC3O60481 467 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 NRASP01111 189 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 CTSSP25774 331 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 CHATP28329 748 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 NSUN5P2Q63ZY6 315 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 LIAT1Q6ZQX7 453 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 ZNF700Q9H0M5 742 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 TNRC18O15417 2968 aaPredicted RBP18.18■□□□□ 0.5
COL23A1-201ENST00000390654 ASPMQ8IZT6 3477 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 ST8SIA3O43173 380 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 JMJD7P0C870 316 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 RPS18P62269 152 aaKnown RBP18.18■□□□□ 0.5
COL23A1-201ENST00000390654 PPA1Q15181 289 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 HAGHQ16775 308 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 SCRT1Q9BWW7 348 aa18.18■□□□□ 0.5
COL23A1-201ENST00000390654 DIDO1Q9BTC0 2240 aaKnown RBP18.18■□□□□ 0.5
COL23A1-201ENST00000390654 FABP1P07148 127 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 RAB5AP20339 215 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 DUSP1P28562 367 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 P2RY1P47900 373 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 LPAL2Q16609 132 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 P4HA3Q7Z4N8 544 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 GPR137BO60478 399 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 MT-ND4LP03901 98 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 ZNF92Q03936 586 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 PLCXD3Q63HM9 321 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 CALHM1Q8IU99 346 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 SPEM1Q8N4L4 309 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 DNASE2BQ8WZ79 361 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 TMEM54Q969K7 222 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 MSI2Q96DH6 328 aaKnown RBP18.17■□□□□ 0.5
COL23A1-201ENST00000390654 DNAJC13O75165 2243 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 A0A0G2JMM0 328 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 A0A1W2PPB8 328 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 A0A1W2PRS3 328 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 KIR3DP1A8MWS1 328 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 SSSCA1O60232 199 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 CCL2P13500 99 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 HERV-K104P61576 105 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 ARL6IP1Q15041 203 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 HLA-BQ31612 363 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 OSR2Q8N2R0 312 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 RNF122Q9H9V4 155 aa18.17■□□□□ 0.5
COL23A1-201ENST00000390654 C19orf25Q9UFG5 118 aaPredicted RBP18.17■□□□□ 0.5
COL23A1-201ENST00000390654 RRP8O43159 456 aaKnown RBP18.16■□□□□ 0.5
COL23A1-201ENST00000390654 OTX1P32242 354 aaPredicted RBP18.16■□□□□ 0.5
COL23A1-201ENST00000390654 GLP1RP43220 463 aa18.16■□□□□ 0.5
COL23A1-201ENST00000390654 RUNX1Q01196 453 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms