RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RILPQ96NA2 401 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CLCC1Q96S66 551 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 HBEGFQ99075 208 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 RNF2Q99496 336 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TMED9Q9BVK6 235 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CDCA4Q9BXL8 241 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ARL6Q9H0F7 186 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM38AQ9H6F2 299 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 BEX1Q9HBH7 125 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM27Q9HBJ8 222 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TMBIM4Q9HC24 238 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 RETNQ9HD89 108 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 FGF20Q9NP95 211 aaPredicted RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ACP6Q9NPH0 428 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 IFT46Q9NQC8 304 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF355PQ9NSJ1 428 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TAS2R1Q9NYW7 299 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF391Q9UJN7 358 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 LSM7Q9UK45 103 aaKnown RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 OR52A1Q9UKL2 312 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 CARHSP1Q9Y2V2 147 aaKnown RBP1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SNX24Q9Y343 169 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 HEY1Q9Y5J3 304 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 C9orf84Q5VXU9 1444 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 SDK2Q58EX2 2172 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 TAF1LQ8IZX4 1826 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 ZBED9Q6R2W3 1325 aa1.38□□□□□ -2.19
TRAV40-201ENST00000390467 MSH6P52701 1360 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 NID2Q14112 1375 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CCNB3Q8WWL7 1395 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 IGHV3-66A0A0C4DH42 116 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 TINCRA0A1B0GVN0 87 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 A0A1W2PP18 115 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ANKRD20A5PA0PJZ0 165 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SMIM9A6NGZ8 99 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RFPL4AA6NLU0 287 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 C17orf51A8MQB3 221 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 A8MUU9 505 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RFPL4AL1F8VTS6 287 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 C15orf65H3BRN8 121 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 KPNA4O00629 521 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CDIPTO14735 213 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RAD1O60671 282 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 EIF1BO60739 113 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 MPDU1O75352 247 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RP2O75695 350 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 DCTN3O75935 186 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 OR7A10O76100 309 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 TDP2O95551 362 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RAB36O95755 333 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CYB5R3P00387 301 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CATP04040 527 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 KLK3P07288 261 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CTSLP07711 333 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CST2P09228 141 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 OR8U9P0C7N5 309 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 HIST1H1EP10412 219 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ABOP16442 354 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 UGT2B7P16662 529 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 COX5AP20674 150 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 OMGP23515 440 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 COL8A2P25067 703 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RPS12P25398 132 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 S100PP25815 95 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SLC6A1P30531 599 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ADORA1P30542 326 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 GPX4P36969 197 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 EIF1P41567 113 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SLCO1A2P46721 670 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RPL5P46777 297 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 YAP1P46937 504 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SRP9P49458 86 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 TTPAP49638 278 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 AP2S1P53680 142 aaPredicted RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 CLDN12P56749 244 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RHOAP61586 193 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ESRRGP62508 458 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SEMG2Q02383 582 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 PRKCDQ05655 676 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SKP2Q13309 424 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 POU6F1Q14863 301 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SPA17Q15506 151 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 IGFBP7Q16270 282 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 VAX1Q5SQQ9 334 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 ZFP1Q6P2D0 407 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 FAM131AQ6UXB0 335 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 FAM19A1Q7Z5A9 133 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 MRPL52Q86TS9 123 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM135Q86UB9 458 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 THOC6Q86W42 341 aaKnown RBP1.37□□□□□ -2.19
TRAV40-201ENST00000390467 SLC30A8Q8IWU4 369 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 BLIDQ8IZY5 108 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 OR6V1Q8N148 313 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 LRRC18Q8N456 261 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 STX19Q8N4C7 294 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 METTL13Q8N6R0 699 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 UBL4BQ8N7F7 174 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 OR1S2Q8NGQ3 325 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 OR51F2Q8NH61 342 aa1.37□□□□□ -2.19
TRAV40-201ENST00000390467 RNASE11Q8TAA1 199 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms