RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 SP6Q3SY56 376 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ARSJQ5FYB0 599 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 KIR2DL5AQ8N109 375 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ZNF2Q9BSG1 426 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 SEMA5BQ9P283 1151 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 A6NCN8 305 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 H0YGG7 62 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ST8SIA3O43173 380 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 TNFSF14O43557 240 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 AHSA1O95433 338 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ZNF43P17038 809 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ECI1P42126 302 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ARF3P61204 181 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 P2RY6Q15077 328 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 NCR3LG1Q68D85 454 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 DEGS2Q6QHC5 323 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ZNF283Q8N7M2 679 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 OR52M1Q8NGK5 317 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 DAZLQ92904 295 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 RBMXL1Q96E39 390 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 TXNIPQ9H3M7 391 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 FAM206AQ9NX38 181 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ASXL3Q9C0F0 2248 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 IGKV1D-8A0A087WSZ0 117 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 TMEM238LA0A1B0GVL6 79 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 SEMA4FO95754 770 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 TMEM187Q14656 261 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 CLEC2AQ6UVW9 174 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 OR5AS1Q8N127 324 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 BOD1Q96IK1 185 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 CENPMQ9NSP4 180 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 HRASLS2Q9NWW9 162 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 CST2P09228 141 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 H2BFMP0C1H6 154 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 ZNF823P16415 610 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 ZNF266Q14584 549 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 FAM185AQ8N0U4 392 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 FAM89BQ8N5H3 189 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 SLC26A10Q8NG04 563 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 OR14L1PQ8NHC6 308 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 DIRC2Q96SL1 478 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 CALHM2Q9HA72 323 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 DECR2Q9NUI1 292 aa12.81□□□□□ -0.36
VPS9D1-201ENST00000389386 LOC102723971A0A1B0GUV8 181 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 PRKNO60260 465 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 RPL29P47914 159 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 POLR2HP52434 150 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 P4HA3Q7Z4N8 544 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 MRPL52Q86TS9 123 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 SLC37A2Q8TED4 501 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 TMEM18Q96B42 140 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 ACY3Q96HD9 319 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 URM1Q9BTM9 101 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 VN1R1Q9GZP7 353 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 OR10A2Q9H208 303 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 OR51B6Q9H340 312 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 FAM221AA4D161 298 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 TGFBR3LH3BV60 316 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 DUSP1P28562 367 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 CCKARP32238 428 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 SFTPDP35247 375 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 CSNK1A1P48729 337 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 RAB11AP62491 216 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 PMS2P11Q13670 270 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 FBXW12Q6X9E4 464 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 MAML2Q8IZL2 1156 aaPredicted RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 CPEB3Q8NE35 698 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 C16orf52Q8NHV5 167 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 TPSD1Q9BZJ3 242 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 PBOV1Q9GZY1 135 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 HIPK2Q9H2X6 1198 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 CHST11Q9NPF2 352 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 GPR173Q9NS66 373 aa12.8□□□□□ -0.36
VPS9D1-201ENST00000389386 NCOR1O75376 2440 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 TRAV36DV7A0A075B6V5 113 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 FOXI3A8MTJ6 420 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 IGHV4-34P06331 123 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 SRFP11831 508 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 PIGPP57054 158 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 FAM189A2Q15884 450 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 SGCBQ16585 318 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 MRPL41Q8IXM3 137 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 C17orf78Q8N4C9 275 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 C18orf12Q96KH6 178 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 GAL3ST4Q96RP7 486 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 CTDSP1Q9GZU7 261 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 GAB2Q9UQC2 676 aa12.79□□□□□ -0.36
VPS9D1-201ENST00000389386 FAM24AA6NFZ4 105 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms