RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 VCX3AQ9NNX9 186 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 NIT2Q9NQR4 276 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 KCNIP2Q9NS61 270 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 TREX1Q9NSU2 369 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 MED9Q9NWA0 146 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 TAS2R3Q9NYW6 316 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 PLAC8Q9NZF1 115 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 PTTG3PQ9NZH4 202 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 PRO2289Q9P1D8 64 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 PSMC3IPQ9P2W1 217 aaPredicted RBP-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 ISY1Q9ULR0 285 aaKnown RBP-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 CLEC4AQ9UMR7 237 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 ZNF257Q9Y2Q1 563 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 MRPS7Q9Y2R9 242 aaKnown RBP-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 LINC00588Q9Y4M8 146 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 HEY1Q9Y5J3 304 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 MACF1Q9UPN3 7388 aaKnown RBP-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 TNIKQ9UKE5 1360 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 PLCH2O75038 1416 aa-0.23□□□□□ -2.45
SNORD28-201ENST00000384706 CNTRLQ7Z7A1 2325 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SLX4Q8IY92 1834 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 IGHV3-15A0A0B4J1V0 119 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 DHRS12A0PJE2 317 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 TSPAN11A1L157 253 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 LINC01619G3V211 115 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 RNASEK-C17orf49H0YIS7 233 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 NDUFAB1O14561 156 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 PLA2G10O15496 165 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CLOCKO15516 846 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ERI3O43414 337 aaKnown RBP-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 NDUFS5O43920 106 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 DHRS3O75911 302 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SOD1P00441 154 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CST1P01037 141 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 HBE1P02100 147 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CRYGDP07320 174 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 RHOCP08134 193 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 RAB5AP20339 215 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 MX1P20591 662 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 GLRA2P23416 452 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SPAM1P38567 509 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 RFC3P40938 356 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 AKR1C3P42330 323 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 PSMB2P49721 201 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ZNF117Q03924 483 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 RELAQ04206 551 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SELENBP1Q13228 472 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 APOFQ13790 326 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 TFDP2Q14188 446 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ZMYND11Q15326 602 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 MRPL23Q16540 153 aaKnown RBP-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ZNF404Q494X3 552 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 FAM229BQ4G0N7 80 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CCDC184Q52MB2 194 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CFAP157Q5JU67 520 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CTSL3PQ5NE16 218 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 FAM27D1Q5T7N8 215 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 C22orf42Q6IC83 251 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CENPPQ6IPU0 288 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SLC8B1Q6J4K2 584 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 FP248Q71RG6 208 aaPredicted RBP-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 OLIG3Q7RTU3 272 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SLC16A14Q7RTX9 510 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 LINC00596Q86U02 117 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SLC30A8Q8IWU4 369 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 VKORC1L1Q8N0U8 176 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SLC35F6Q8N357 371 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 BBS5Q8N3I7 341 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 Q8N6K4 173 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 C15orf53Q8NAA6 179 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CYB561A3Q8NBI2 242 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ZNF439Q8NDP4 499 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 OR8B12Q8NGG6 310 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 OR8J1Q8NGP2 316 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ACMSDQ8TDX5 336 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 TUBGCP3Q96CW5 907 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SMARCD1Q96GM5 515 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 SMIM8Q96KF7 97 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 FAM19A4Q96LR4 140 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 GPR21Q99679 349 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 GON7Q9BXV9 100 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ACTR3CQ9C0K3 210 aaPredicted RBP-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 DBNDD1Q9H9R9 158 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ACP6Q9NPH0 428 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 C20orf96Q9NUD7 363 aaPredicted RBP-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 PRO0628Q9UI54 55 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ODF2LQ9ULJ1 636 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 PSMD13Q9UNM6 376 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 BTRCQ9Y297 605 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 PHLDA3Q9Y5J5 127 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 MROH7Q68CQ1 1323 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 UBN2Q6ZU65 1347 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 ABCA4P78363 2273 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 PLEKHG2Q9H7P9 1386 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 CUL9Q8IWT3 2517 aa-0.24□□□□□ -2.45
SNORD28-201ENST00000384706 TMSB15BA0A087X1C1 80 aa-0.25□□□□□ -2.45
SNORD28-201ENST00000384706 RFPL4AA6NLU0 287 aa-0.25□□□□□ -2.45
SNORD28-201ENST00000384706 ZNF705FA8MVS1 300 aaPredicted RBP-0.25□□□□□ -2.45
SNORD28-201ENST00000384706 RFPL4AL1F8VTS6 287 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms