RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 DGCR2P98153 550 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 IKZF1Q13422 519 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 MADCAM1Q13477 382 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 ASAH1Q13510 395 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 MPPED2Q15777 294 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 PIGYQ3MUY2 71 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 PLAC9Q5JTB6 97 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 ACP7Q6ZNF0 438 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 DTX2Q86UW9 622 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 MOGAT3Q86VF5 341 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 POC5Q8NA72 575 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 NEU4Q8WWR8 484 aaPredicted RBP7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 ST8SIA4Q92187 359 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 GTF3AQ92664 365 aaKnown RBP7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 NEUROG1Q92886 237 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 TRIM63Q969Q1 353 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 SEH1LQ96EE3 360 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 CHST6Q9GZX3 395 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 SAP30LQ9HAJ7 183 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 GCM1Q9NP62 436 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 IFT46Q9NQC8 304 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 TREM2Q9NZC2 230 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 EDARQ9UNE0 448 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 PPP1R3CQ9UQK1 317 aa7.48□□□□□ -1.21
RNU1-28P-201ENST00000383861 HCFC1P51610 2035 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 ANKRD20A5PA0PJZ0 165 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 TMEM235A6NFC5 223 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 LHBP01229 141 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 MUC1P15941 1255 aaPredicted RBP7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 TBPP20226 339 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 DTYMKP23919 212 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 MDH2P40926 338 aaKnown RBP7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 KCNJ3P48549 501 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 TAS2R19P59542 299 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 CCL8P80075 99 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 IFITM3Q01628 133 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 TLE4Q04727 773 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 ACTBL2Q562R1 376 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 NKAPLQ5M9Q1 402 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 ATAD3CQ5T2N8 411 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 SHEQ5VZ18 495 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 SIGIRRQ6IA17 410 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 ZNF826PQ6ZT77 177 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 C6orf201Q7Z4U5 140 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 TRAPPC6BQ86SZ2 158 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 TMEM229BQ8NBD8 167 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 PPP1R35Q8TAP8 253 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 ZNF488Q96MN9 340 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 CMSS1Q9BQ75 279 aaKnown RBP7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 OCSTAMPQ9BR26 566 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 ZMAT3Q9HA38 289 aaKnown RBP7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 RCC2Q9P258 522 aaKnown RBP7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 DNAJB11Q9UBS4 358 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 KLK11Q9UBX7 282 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 CACNG2Q9Y698 323 aa7.47□□□□□ -1.21
RNU1-28P-201ENST00000383861 BSNQ9UPA5 3926 aa7.46□□□□□ -1.21
RNU1-28P-201ENST00000383861 USP24Q9UPU5 2620 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 MEIOCA2RUB1 952 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 FAM221AA4D161 298 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 CLEC18AA5D8T8 446 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 F8VVB4 439 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 F8VWA3 439 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 LYRM1O43325 122 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 FSTL3O95633 263 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 HAND1O96004 215 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 AKAIN1P0CW23 69 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 PLA2G2AP14555 144 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 COX6B1P14854 86 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 ZNF44P15621 663 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 LMO1P25800 156 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 MRPS11P82912 194 aaKnown RBP7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 KLF9Q13886 244 aaPredicted RBP7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 MEF2DQ14814 521 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 KCNJ8Q15842 424 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 SRSF7Q16629 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 MICBQ29980 383 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 HFEQ30201 348 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 TRIM16LQ309B1 348 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 RNASE12Q5GAN4 147 aaKnown RBP7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 CLEC18BQ6UXF7 455 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 C20orf204Q6ZNR8 217 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 CLEC18CQ8NCF0 446 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 CHPT1Q8WUD6 406 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 VRK1Q99986 396 aaPredicted RBP7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 FAAP24Q9BTP7 215 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 TRAF4Q9BUZ4 470 aaPredicted RBP7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 C12orf4Q9NQ89 552 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 DLL4Q9NR61 685 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 COPZ2Q9P299 210 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 NLKQ9UBE8 527 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 MGAT4AQ9UM21 535 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 KCNK7Q9Y2U2 307 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 WIPI2Q9Y4P8 454 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 ATRXP46100 2492 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 DSPP15924 2871 aaKnown RBP7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 RTTNQ86VV8 2226 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 BOD1L1Q8NFC6 3051 aa7.46□□□□□ -1.22
RNU1-28P-201ENST00000383861 TRAV38-1A0A0B4J264 116 aa7.45□□□□□ -1.22
RNU1-28P-201ENST00000383861 IGHV1-69-2A0A0G2JMI3 117 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms