RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PLPP3O14495 311 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 SCGNO76038 276 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 HPNP05981 417 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 ANOS1P23352 680 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 APOBEC1P41238 236 aaKnown RBP12.12□□□□□ -0.47
SDC1-202ENST00000381150 PPA1Q15181 289 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 VAX1Q5SQQ9 334 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
SDC1-202ENST00000381150 FAAP24Q9BTP7 215 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 MYO7BQ6PIF6 2116 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 IGHV3-20A0A0C4DH32 117 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 A6NIZ1 184 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 ALG1L2C9J202 215 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 MASP2O00187 686 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 SSSCA1O60232 199 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 FOSL2P15408 326 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 THBS4P35443 961 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 RAP1BP61224 184 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 DCAF7P61962 342 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 VAMP2P63027 116 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 WWTR1Q9GZV5 400 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 PLEKHA2Q9HB19 425 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 A0A1W2PQD3 144 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 ST8SIA3O43173 380 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 HLA-HP01893 362 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 FAHP16930 419 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 ATP6V0CP27449 155 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 IL2RGP31785 369 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 PCK2Q16822 640 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 LCN15Q6UWW0 184 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 ZNF519Q8TB69 540 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 PTX4Q96A99 478 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 PGAM5Q96HS1 289 aa12.12□□□□□ -0.47
SDC1-202ENST00000381150 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
SDC1-202ENST00000381150 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 P2RY1P47900 373 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 CLRN1P58418 232 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 NSDHLQ15738 373 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 GPR157Q5UAW9 335 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 PLXDC1Q8IUK5 500 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 PLPP5Q8NEB5 264 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 OR1N1Q8NGS0 311 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 ZNF501Q96CX3 271 aaPredicted RBP12.11□□□□□ -0.47
SDC1-202ENST00000381150 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 CPAMD8Q8IZJ3 1885 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 FAM230AA0A1W2PPH8 454 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 A0A1W2PR80 420 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 ZNF728P0DKX0 622 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 SLC6A8P48029 635 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
SDC1-202ENST00000381150 FGF8P55075 233 aaPredicted RBP12.11□□□□□ -0.47
SDC1-202ENST00000381150 MFAP5Q13361 173 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
SDC1-202ENST00000381150 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
SDC1-202ENST00000381150 TVP23CQ96ET8 276 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
SDC1-202ENST00000381150 DIDO1Q9BTC0 2240 aaKnown RBP12.11□□□□□ -0.47
SDC1-202ENST00000381150 CCDC187A0A096LP49 1063 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 NPIPB7O75200 414 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 GLB1P16278 677 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 QRFPP83859 136 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 KISS1Q15726 138 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 MPV17LQ2QL34 196 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 ZNF581Q9P0T4 197 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 MCTS1Q9ULC4 181 aaKnown RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 LOC390937A0A1W2PQ73 354 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 RPS2P15880 293 aaKnown RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 MRPS34P82930 218 aaKnown RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 LRRC18Q8N456 261 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 MESP1Q9BRJ9 268 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 C5orf63A6NC05 138 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 SPRY1O43609 319 aaPredicted RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 GPR137BO60478 399 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 EPHA1P21709 976 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 FBLP22087 321 aaKnown RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 POLR2HP52434 150 aaKnown RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 HSF1Q00613 529 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 SHBQ15464 509 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 MRPL41Q8IXM3 137 aaKnown RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 C1orf87Q8N0U7 546 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
SDC1-202ENST00000381150 SRPK3Q9UPE1 567 aa12.1□□□□□ -0.47
SDC1-202ENST00000381150 PTBP3O95758 552 aaKnown RBP12.09□□□□□ -0.47
SDC1-202ENST00000381150 FUT3P21217 361 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 SFTPDP35247 375 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 MMP16P51512 607 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 LANCL3Q6ZV70 420 aa12.09□□□□□ -0.47
SDC1-202ENST00000381150 CMTM1Q8IZ96 169 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms