RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 RPS2P15880 293 aaKnown RBP16.48■□□□□ 0.23
GMDS-201ENST00000380805 RPA2P15927 270 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 BCL3P20749 454 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 GNG3P63215 75 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 SUPT4H1P63272 117 aaKnown RBP16.48■□□□□ 0.23
GMDS-201ENST00000380805 OPCMLQ14982 345 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 SRSF7Q16629 238 aaKnown RBP eCLIP16.48■□□□□ 0.237e-7■□□□□ 9.2
GMDS-201ENST00000380805 VWA1Q6PCB0 445 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 TMEM65Q6PI78 240 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 HIST1H2AAQ96QV6 131 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 PKIBQ9C010 78 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 CLEC4MQ9H2X3 399 aaPredicted RBP16.48■□□□□ 0.23
GMDS-201ENST00000380805 C12orf4Q9NQ89 552 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 MTCH1Q9NZJ7 389 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 TNFSF13O75888 250 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 LYZL6O75951 148 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 CELA3BP08861 270 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 CBR1P16152 277 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 VAMP1P23763 118 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 ARPC4P59998 168 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 IL24Q13007 206 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 DHRS11Q6UWP2 260 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 LINC00596Q86U02 117 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 ZNF573Q86YE8 665 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 C17orf78Q8N4C9 275 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 RHOFQ9HBH0 211 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 NECAP2Q9NVZ3 263 aa16.48■□□□□ 0.23
GMDS-201ENST00000380805 LILRA1O75019 489 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 CGAP01215 116 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 SLC25A4P12235 298 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 CNEP1R1Q8N9A8 125 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 WDR31Q8NA23 367 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 NAXEQ8NCW5 288 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 SLAMF9Q96A28 289 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 PLK3Q9H4B4 646 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 CDH20Q9HBT6 801 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 LHX6Q9UPM6 363 aa16.47■□□□□ 0.23
GMDS-201ENST00000380805 IFNA7P01567 189 aa16.46■□□□□ 0.23
GMDS-201ENST00000380805 PDGFAP04085 211 aa16.46■□□□□ 0.23
GMDS-201ENST00000380805 CRHP06850 196 aa16.46■□□□□ 0.23
GMDS-201ENST00000380805 SORDQ00796 357 aa16.46■□□□□ 0.23
GMDS-201ENST00000380805 CLEC18BQ6UXF7 455 aa16.46■□□□□ 0.23
GMDS-201ENST00000380805 Q6ZPA2 131 aa16.46■□□□□ 0.23
GMDS-201ENST00000380805 DPCDQ9BVM2 203 aaPredicted RBP16.46■□□□□ 0.23
GMDS-201ENST00000380805 OBP2BQ9NPH6 170 aa16.46■□□□□ 0.23
GMDS-201ENST00000380805 TPRP12270 2363 aaKnown RBP16.46■□□□□ 0.23
GMDS-201ENST00000380805 TRAPPC2LH3BP13 241 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 ERVH48-1M5A8F1 160 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 ARPC5O15511 151 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 OR7C1O76099 320 aaPredicted RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 CTSDP07339 412 aaPredicted RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 OR5H8P0DN80 308 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 RAC2P15153 192 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 S100A11P31949 105 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 IDH3GP51553 393 aaPredicted RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 PPP1CBP62140 327 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 FOXF2Q12947 444 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 FAM76BQ5HYJ3 339 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 OR2T2Q6IF00 324 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 SEM1Q6ZVN7 128 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 RBMXL3Q8N7X1 1067 aaKnown RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 KDF1Q8NAX2 398 aaPredicted RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 BHLHE23Q8NDY6 225 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 ZNF2Q9BSG1 426 aaPredicted RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 OR51I2Q9H344 312 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 ZNF286AQ9HBT8 521 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 RAB18Q9NP72 206 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 ACACBO00763 2458 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 FXYD6-FXYD2A0A087WZ82 144 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 F8VVB4 439 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 F8VWA3 439 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 TUBG1P23258 451 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 EIF2S3LQ2VIR3 472 aaKnown RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 CASTOR1Q8WTX7 329 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 GTF3AQ92664 365 aaKnown RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 FXYD6Q9H0Q3 95 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 TUBG2Q9NRH3 451 aa16.45■□□□□ 0.22
GMDS-201ENST00000380805 DSPP15924 2871 aaKnown RBP16.45■□□□□ 0.22
GMDS-201ENST00000380805 IQCF6A8MYZ5 107 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 J3QT63 122 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 CCSO14618 274 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 SYNGR1O43759 233 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 NAPSAO96009 420 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 CALCRP30988 508 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 OPRM1P35372 400 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 PTGER4P35408 488 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 BAMBIQ13145 260 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 EXOSC2Q13868 293 aaKnown RBP16.44■□□□□ 0.22
GMDS-201ENST00000380805 IL13RA2Q14627 380 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 P2RY6Q15077 328 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 TMUB2Q71RG4 321 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 COQ8AQ8NI60 647 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 DYRK2Q92630 601 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 EXTL1Q92935 676 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 STARD4Q96DR4 205 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 LIME1Q9H400 295 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 IFT22Q9H7X7 185 aa16.44■□□□□ 0.22
GMDS-201ENST00000380805 C14orf166Q9Y224 244 aaKnown RBP16.44■□□□□ 0.22
GMDS-201ENST00000380805 IGLV1-44P01699 117 aa16.43■□□□□ 0.22
GMDS-201ENST00000380805 CRYABP02511 175 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms