RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TRAV20A0A0B4J274 112 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 CLEC2AQ6UVW9 174 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 OR1K1Q8NGR3 316 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 C12orf57Q99622 126 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 FABP5Q01469 135 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 METTL26Q96S19 204 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 PPM1DO15297 605 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 CELA2BP08218 269 aaPredicted RBP11.06□□□□□ -0.64
CHD3-203ENST00000380358 SSX8Q7RTT4 187 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 MCHR2Q969V1 340 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 ELOVL1Q9BW60 279 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 TARM1B6A8C7 271 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 TAAR5O14804 337 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 RSPO2Q6UXX9 243 aaPredicted RBP11.06□□□□□ -0.64
CHD3-203ENST00000380358 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 CT55Q8WUE5 264 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 PITPNC1Q9UKF7 332 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
CHD3-203ENST00000380358 DIDO1Q9BTC0 2240 aaKnown RBP11.05□□□□□ -0.64
CHD3-203ENST00000380358 IGHV5-51A0A0C4DH38 117 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 MMDQ15546 238 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 GGTA1PQ4G0N0 100 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 KRTCAP3Q53RY4 240 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 OVCH2Q7RTZ1 564 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 C16orf82Q7Z2V1 217 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 LYG2Q86SG7 212 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 OR1L6Q8NGR2 347 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 A0A087WUJ7 227 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 TRAV38-1A0A0B4J264 116 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 UPK1AO00322 258 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 LALBAP00709 142 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 EGR3Q06889 387 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 OR4C13Q8NGP0 309 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 OR4X1Q8NH49 305 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 DUX5Q96PT3 197 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 PLA2G2FQ9BZM2 168 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 WDR13Q9H1Z4 485 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 GLRX2Q9NS18 164 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
CHD3-203ENST00000380358 FKBP2P26885 142 aaKnown RBP11.05□□□□□ -0.64
CHD3-203ENST00000380358 ID1P41134 155 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 PTGFRP43088 359 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 DYNLT3P51808 116 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 MOGAT2Q3SYC2 334 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 OR10G4Q8NGN3 311 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 OR10G9Q8NGN4 311 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 OR10G7Q8NGN6 311 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 Q8WTZ3 238 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 STARD4Q96DR4 205 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 ZDHHC8Q9ULC8 765 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 MYO7AQ13402 2215 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
CHD3-203ENST00000380358 LTBP3Q9NS15 1303 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 IGKV6D-21A0A0A0MT36 114 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 MPDU1O75352 247 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 P01737 135 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 VDAC1P21796 283 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 HIST3H3Q16695 136 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 ZNF880Q6PDB4 577 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 ST8SIA1Q92185 356 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 B9D1Q9UPM9 204 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 RNF24Q9Y225 148 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 AMDHD2Q9Y303 409 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 RP1L1Q8IWN7 2480 aaPredicted RBP11.05□□□□□ -0.64
CHD3-203ENST00000380358 TMEM189-UBE2V1I3L0A0 370 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 LANCL1O43813 399 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 PRSS2P07478 247 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 INSL4Q14641 139 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 GABRA6Q16445 453 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 HIKESHIQ53FT3 197 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 COL5A1-AS1Q5SY13 56 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 LYSMD2Q8IV50 215 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 JAM3Q9BX67 310 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 CYSLTR2Q9NS75 346 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 PARP4Q9UKK3 1724 aaKnown RBP11.05□□□□□ -0.64
CHD3-203ENST00000380358 TMEM196Q5HYL7 178 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 STXBP6Q8NFX7 210 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 DDB2Q92466 427 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 C10orf90Q96M02 699 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 NPAS1Q99742 590 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 CBY1Q9Y3M2 126 aa11.05□□□□□ -0.64
CHD3-203ENST00000380358 MMP15P51511 669 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 AQP6Q13520 282 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 ZCCHC14Q8WYQ9 949 aaKnown RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 MTCH2Q9Y6C9 303 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 C3orf85A0A1B0GTC6 90 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 CTSLP07711 333 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 FUT3P21217 361 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 MRPS11P82912 194 aaKnown RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 DUSP8Q13202 625 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 MEIG1Q5JSS6 88 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 PDLIM5Q96HC4 596 aaKnown RBP11.04□□□□□ -0.64
CHD3-203ENST00000380358 CXXC4Q9H2H0 198 aa11.04□□□□□ -0.64
CHD3-203ENST00000380358 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms