RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 H0YIZ8 118 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 SHOXO15266 292 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 SYNGR4O95473 234 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 KNG1P01042 644 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 SPINK2P20155 84 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CHATP28329 748 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 NPBWR2P48146 333 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 LUMP51884 338 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PPIAP62937 165 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PDZK1IP1Q13113 114 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CLN3Q13286 438 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 RNFT1Q5M7Z0 435 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 Q6ZPA2 131 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 COLCA1Q6ZS62 124 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 TMEM17Q86X19 198 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF100Q8IYN0 542 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OR1S1Q8NH92 325 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 SPSB4Q96A44 273 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CCDC120Q96HB5 630 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OR10C1Q96KK4 312 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 TMEM68Q96MH6 324 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF2Q9BSG1 426 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 LINC00470Q9BZP3 86 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 FGF23Q9GZV9 251 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 DEFB127Q9H1M4 99 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 RGCCQ9H4X1 137 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CHMP1AQ9HD42 196 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 SDHAF2Q9NX18 166 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CSAG2Q9Y5P2 127 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 TNRC6AQ8NDV7 1962 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF816-ZNF321PA0A0X1KG74 233 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 MFSD2BA6NFX1 497 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ARGFXA6NJG6 315 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 GATCO43716 136 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 NME2P1O60361 137 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CA11O75493 328 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 NGFP01138 241 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 NME2P22392 152 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PTGER4P35408 488 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 SRSF6Q13247 344 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF345Q14585 488 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ACOT7LQ6ZUV0 252 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OR51F2Q8NH61 342 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 THAP6Q8TBB0 222 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 RRNAD1Q96FB5 475 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 MARS2Q96GW9 593 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PRDM14Q9GZV8 571 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 BCO1Q9HAY6 547 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ANXA10Q9UJ72 324 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ST3GAL6Q9Y274 331 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OTOGLQ3ZCN5 2332 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 BOD1L1Q8NFC6 3051 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 RPL36A-HNRNPH2H7BZ11 118 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 XRCC2O43543 280 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OR2F2O95006 317 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 TNFSF4P23510 183 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PSMB6P28072 239 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 FUT6P51993 359 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OR2F1Q13607 317 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 NRN1LQ496H8 165 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 TMPRSS7Q7RTY8 843 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CCDC36Q8IYA8 594 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OSR2Q8N2R0 312 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 OR56B2PQ8NGI1 322 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 CMSS1Q9BQ75 279 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ACKR4Q9NPB9 350 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PARPBPQ9NWS1 579 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 PRSS50Q9UI38 385 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF391Q9UJN7 358 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 HSF4Q9ULV5 492 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 SLC7A11Q9UPY5 501 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 LGALS8O00214 317 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 BCL2L11O43521 198 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 FCGR3AP08637 254 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 CD79AP11912 226 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 PGAM2P15259 253 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 TRIP6Q15654 476 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 UNQ6126/PRO20091Q6UXV3 157 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF611Q8N823 705 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 APH1AQ96BI3 265 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 LINC00052Q96N35 136 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF471Q9BX82 626 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 NMES1Q9C002 83 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 GLRX2Q9NS18 164 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 DSPP15924 2871 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 KANTRA0A1W2PQU2 76 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 F8VVB4 439 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 F8VWA3 439 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 WISP2O76076 250 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 SNAPINO95295 136 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 HOXB5P09067 269 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 OR5H8P0DN80 308 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 RAB1AP62820 205 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 ARL6IP1Q15041 203 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 SLC25A26Q70HW3 274 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 C5orf24Q7Z6I8 188 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 VASH2Q86V25 355 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 LRRC20Q8TCA0 184 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms