RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SMG1Q96Q15 3661 aaKnown RBP20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 ZFYVE26Q68DK2 2539 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 F8VVB4 439 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 F8VWA3 439 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 LYRM1O43325 122 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 RCVRNP35243 200 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 FAUP35544 74 aaKnown RBP20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 KLF9Q13886 244 aaPredicted RBP20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 TRAPPC6BQ86SZ2 158 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 ZNF488Q96MN9 340 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 UFSP2Q9NUQ7 469 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 FAIMQ9NVQ4 179 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 CACNG2Q9Y698 323 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 LINC00854A0A1B0GVQ3 168 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 ANKRD20A5PA0PJZ0 165 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 NAP1L6A6NFF2 107 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 PLA2G10O15496 165 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 PLAUP00749 431 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 GLAP06280 429 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 SNRPD2P62316 118 aaKnown RBP20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 MRPS15P82914 257 aaKnown RBP20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 GUCA2AQ02747 115 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 DAZAP2Q15038 168 aaPredicted RBP20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 MPPED2Q15777 294 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 SMIM21Q3B7S5 101 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 SIGIRRQ6IA17 410 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 CENPSQ8N2Z9 138 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 ITLN1Q8WWA0 313 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 NEUROG1Q92886 237 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 C11orf54Q9H0W9 315 aaPredicted RBP20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 IFT46Q9NQC8 304 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 KCNK7Q9Y2U2 307 aa20.77■□□□□ 0.92
ECHDC3-201ENST00000379215 IKZF1Q13422 519 aa20.76■□□□□ 0.91
ECHDC3-201ENST00000379215 ZNF146Q15072 292 aa20.76■□□□□ 0.91
ECHDC3-201ENST00000379215 C6orf201Q7Z4U5 140 aa20.76■□□□□ 0.91
ECHDC3-201ENST00000379215 FAM90A1Q86YD7 464 aa20.76■□□□□ 0.91
ECHDC3-201ENST00000379215 BATF2Q8N1L9 274 aa20.76■□□□□ 0.91
ECHDC3-201ENST00000379215 MUC15Q8N387 334 aa20.76■□□□□ 0.91
ECHDC3-201ENST00000379215 RCC2Q9P258 522 aaKnown RBP20.76■□□□□ 0.91
ECHDC3-201ENST00000379215 IGHV3-64DA0A0J9YX35 117 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 GLRA1P23415 457 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 TAS2R19P59542 299 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 DCDC5Q6ZRR9 648 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 OR11L1Q8NGX0 322 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 LILRB1Q8NHL6 650 aaPredicted RBP20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 ENKURQ8TC29 256 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 Q8TCH9 128 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 NUDCD2Q8WVJ2 157 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 HPS1Q92902 700 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 FBXW5Q969U6 566 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 ATAD3CQ5T2N8 411 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 ZNF826PQ6ZT77 177 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 MOGAT3Q86VF5 341 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 TMEM229BQ8NBD8 167 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 LRRC29Q8WV35 223 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 DECR2Q9NUI1 292 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 NPTNQ9Y639 398 aa20.75■□□□□ 0.91
ECHDC3-201ENST00000379215 C19orf84I3L1E1 186 aa20.74■□□□□ 0.91
ECHDC3-201ENST00000379215 SNU13P55769 128 aaKnown RBP20.74■□□□□ 0.91
ECHDC3-201ENST00000379215 RBM39Q14498 530 aaKnown RBP20.74■□□□□ 0.91
ECHDC3-201ENST00000379215 OCSTAMPQ9BR26 566 aa20.74■□□□□ 0.91
ECHDC3-201ENST00000379215 PLCE1Q9P212 2302 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 RELNP78509 3460 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 SRRM5B3KS81 715 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 SH2D1BO14796 132 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 KNG1P01042 644 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 IRF2P14316 349 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 TBPP20226 339 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 SWI5Q1ZZU3 235 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 MST1LQ2TV78 715 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 OLFML2AQ68BL7 652 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 ACP7Q6ZNF0 438 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 CHST6Q9GZX3 395 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 SAP30LQ9HAJ7 183 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 GCM1Q9NP62 436 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 ELF5Q9UKW6 265 aaPredicted RBP20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 ANAPC10Q9UM13 185 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 ADGRG4Q8IZF6 3080 aa20.73■□□□□ 0.91
ECHDC3-201ENST00000379215 MCRIP1C9JLW8 97 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 DEGS1O15121 323 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 SSX5O60225 188 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 AKAIN1P0CW23 69 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 DTYMKP23919 212 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 MEX3BQ6ZN04 569 aaKnown RBP20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 GDPD3Q7L5L3 318 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 CMSS1Q9BQ75 279 aaKnown RBP20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 RNF7Q9UBF6 113 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 IL36RNQ9UBH0 155 aa20.72■□□□□ 0.91
ECHDC3-201ENST00000379215 FAM240BA0A1B0GVZ2 78 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 MEIS3P1A6NDR6 274 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 LRRC30A6NM36 301 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 IFNL4K9M1U5 179 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 ZNF44P15621 663 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 PPOXP50336 477 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 AGAP6Q5VW22 663 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 NRARPQ7Z6K4 114 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 SULT4A1Q9BR01 284 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 FAAP24Q9BTP7 215 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 SEBOXQ9HB31 216 aaPredicted RBP20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 COPZ2Q9P299 210 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms