RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ASCL5Q7RTU5 278 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 NEIL1Q96FI4 390 aaPredicted RBP12.51□□□□□ -0.41
TRIM13-202ENST00000378182 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 CTSVO60911 334 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 EPXP11678 715 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 HLA-GP17693 338 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 FPR2P25090 351 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 ADAMTS17Q8TE56 1095 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 SLC25A37Q9NYZ2 338 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 CES1P1Q9UKY3 287 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 HAND1O96004 215 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 SNRPCP09234 159 aaKnown RBP12.51□□□□□ -0.41
TRIM13-202ENST00000378182 GCSHP23434 173 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 CTU2Q2VPK5 515 aaKnown RBP12.51□□□□□ -0.41
TRIM13-202ENST00000378182 NTMQ9P121 344 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 PJVKQ0ZLH3 352 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 UQCC1Q9NVA1 299 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 TINAGQ9UJW2 476 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 C3orf85A0A1B0GTC6 90 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 LANCL1O43813 399 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 DHRS3O75911 302 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 EPPINO95925 133 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 PRSS1P07477 247 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 ID1P41134 155 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 ETFDHQ16134 617 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 PPP1R1CQ8WVI7 109 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 PIMREGQ9BSJ6 248 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 OPN3Q9H1Y3 402 aaPredicted RBP12.51□□□□□ -0.41
TRIM13-202ENST00000378182 NAT8BQ9UHF3 227 aa12.51□□□□□ -0.41
TRIM13-202ENST00000378182 IGLV3-27P01718 113 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 GIPP09681 153 aaPredicted RBP12.5□□□□□ -0.41
TRIM13-202ENST00000378182 PELI3Q8N2H9 469 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 HSBP1O75506 76 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 DDOSTP39656 456 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 ZNF137PP52743 207 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 CDK5R1Q15078 307 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 OR4C16Q8NGL9 310 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.5□□□□□ -0.41
TRIM13-202ENST00000378182 PRICKLE4Q2TBC4 344 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 MRGPRX3Q96LB0 322 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 PLXNB2O15031 1838 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 NXPH1P58417 271 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 GON7Q9BXV9 100 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
TRIM13-202ENST00000378182 CDIPTO14735 213 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 WNT5AP41221 380 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 GPR6P46095 362 aaPredicted RBP12.5□□□□□ -0.41
TRIM13-202ENST00000378182 YBX1P67809 324 aaKnown RBP12.5□□□□□ -0.41
TRIM13-202ENST00000378182 MRPS11P82912 194 aaKnown RBP12.5□□□□□ -0.41
TRIM13-202ENST00000378182 C1orf185Q5T7R7 199 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 OTOSQ8NHW6 89 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 LINC00615Q96LM1 132 aaPredicted RBP12.5□□□□□ -0.41
TRIM13-202ENST00000378182 PARD6AQ9NPB6 346 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 PTHLHP12272 177 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 SKP2Q13309 424 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 ADIPOR1Q96A54 375 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 SCN1AP35498 2009 aa12.5□□□□□ -0.41
TRIM13-202ENST00000378182 MDH2P40926 338 aaKnown RBP12.49□□□□□ -0.41
TRIM13-202ENST00000378182 JMJD6Q6NYC1 403 aaPredicted RBP12.49□□□□□ -0.41
TRIM13-202ENST00000378182 NRTNQ99748 197 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 KCNK15Q9H427 330 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 TMEM30AQ9NV96 361 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 SLC25A10Q9UBX3 287 aaPredicted RBP12.49□□□□□ -0.41
TRIM13-202ENST00000378182 OR2T8A6NH00 312 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 GSTZ1O43708 216 aaPredicted RBP12.49□□□□□ -0.41
TRIM13-202ENST00000378182 SRD5A2P31213 254 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 FAM222BQ8WU58 562 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 FGF11Q92914 225 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
TRIM13-202ENST00000378182 C1RLQ9NZP8 487 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 TRAV34A0A0B4J273 112 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 FOXL2P58012 376 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 NKG7Q16617 165 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 RPEL1Q2QD12 228 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 C16orf82Q7Z2V1 217 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 ZNF547Q8IVP9 402 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 PP6455Q8WZ26 134 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 HGDQ93099 445 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 PERPQ96FX8 193 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 CACFD1Q9UGQ2 172 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 IGHV3-72A0A0B4J1Y9 119 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 IGHA1P01876 353 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 IGHA2P01877 340 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 LIMS3P0CW19 117 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 LIMS4P0CW20 117 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 NAT2P11245 290 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 ACAA2P42765 397 aaKnown RBP12.49□□□□□ -0.41
TRIM13-202ENST00000378182 FAM162BQ5T6X4 162 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 MOB1BQ7L9L4 216 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 Q8WTZ3 238 aa12.49□□□□□ -0.41
TRIM13-202ENST00000378182 ZCCHC14Q8WYQ9 949 aaKnown RBP12.49□□□□□ -0.41
TRIM13-202ENST00000378182 ZNF665Q9H7R5 613 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms