RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CMC2Q9NRP2 79 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 IER3IP1Q9Y5U9 82 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 FFAR1O14842 300 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 PPP2CBP62714 309 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 PPP2CAP67775 309 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 NTHL1P78549 312 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 CLEC1AQ8NC01 280 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 CADM4Q8NFZ8 388 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 OR2AJ1Q8NGZ0 328 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 UBTD1Q9HAC8 227 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 MANBALQ9NQG1 85 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 LRIT1Q9P2V4 623 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 VSIG4Q9Y279 399 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 RHBDL1O75783 438 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 HOXB2P14652 356 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF43P17038 809 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 DRD1P21728 446 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 OTX2P32243 289 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 MLC1Q15049 377 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM64Q6YI46 380 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 BOD1L2Q8IYS8 172 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 PLPP7Q8NBV4 271 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 PLEK2Q9NYT0 353 aa10.45□□□□□ -0.74
NPHP4-202ENST00000378161 M0R2Z0 102 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 NRASP01111 189 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 KRASP01116 189 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 RPS20P60866 119 aaKnown RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 OR1Q1Q15612 314 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 SPIN3Q5JUX0 258 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF547Q8IVP9 402 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 OR52E1Q8NGJ3 308 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 OR4F5Q8NH21 305 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 LHX4Q969G2 390 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 OR4F4Q96R69 305 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ANKRD31Q8N7Z5 1873 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 KIAA1324LA8MWY0 1029 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 RPL36A-HNRNPH2H7BZ11 118 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 HMGN4O00479 90 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ISLRO14498 428 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 SRP19P09132 144 aaKnown RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 CCR2P41597 374 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 EMP2P54851 167 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 AESQ08117 197 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 C9orf135Q5VTT2 229 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 TSEN54Q7Z6J9 526 aaKnown RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 BHLHE23Q8NDY6 225 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 TRAPPC2LQ9UL33 140 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 A0A1B0GU03 582 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF253O75346 499 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 MPIG6BO95866 241 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 CTSDP07339 412 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 FUT1P19526 365 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 EMG1Q92979 244 aaKnown RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 TAF1LQ8IZX4 1826 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF891A8MT65 544 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 NUDT3O95989 172 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ALOX5APP20292 161 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 UCP1P25874 307 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 PDX1P52945 283 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 CTXN1P60606 82 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 B4GALNT1Q00973 533 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 GPM6BQ13491 265 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 EIF4EBP2Q13542 120 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 NNATQ16517 81 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 HLA-DRB5Q30154 266 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM177Q53S58 311 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 RAET1LQ5VY80 246 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 MED25Q71SY5 747 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 PNKDQ8N490 385 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 GATSQ8NAP1 163 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ZFYVE21Q9BQ24 234 aa10.44□□□□□ -0.74
NPHP4-202ENST00000378161 ARID1BQ8NFD5 2236 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-202ENST00000378161 CHD3Q12873 2000 aaKnown RBP10.43□□□□□ -0.74
NPHP4-202ENST00000378161 TRAV27A0A087WT01 109 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 FAM221AA4D161 298 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 FCN1O00602 326 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 CLDN1O95832 211 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 DUSP1P28562 367 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 BTG2P78543 158 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 C17orf67Q0P5P2 114 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 CPEB2Q7Z5Q1 589 aaKnown RBP10.43□□□□□ -0.74
NPHP4-202ENST00000378161 FAM219AQ8IW50 185 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 CCDC71LQ8N9Z2 235 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 SLC45A2Q9UMX9 530 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 IGHV1-69-2A0A0G2JMI3 117 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM225BP0DP42 221 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 TUSC5Q8IXB3 177 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 TMEM56-RWDD3S4R434 201 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 FIGNL2A6NMB9 653 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 DOC2BQ14184 412 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 MRPL2Q5T653 305 aaKnown RBP10.43□□□□□ -0.74
NPHP4-202ENST00000378161 GUCD1Q96NT3 240 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 CYTL1Q9NRR1 136 aa10.43□□□□□ -0.74
NPHP4-202ENST00000378161 WSB2Q9NYS7 404 aaPredicted RBP10.43□□□□□ -0.74
NPHP4-202ENST00000378161 IGLV3-16A0A075B6K0 115 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 SLC17A2O00624 439 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 CD160O95971 181 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 OGFOD3Q6PK18 319 aa10.42□□□□□ -0.74
NPHP4-202ENST00000378161 POM121L2Q96KW2 1035 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms