RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 FOLR1P15328 257 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 OR5C1Q8NGR4 320 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 BOD1Q96IK1 185 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 FAM230AA0A1W2PPH8 454 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 NKX2-6A6NCS4 301 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 FOXI3A8MTJ6 420 aaPredicted RBP13.84□□□□□ -0.19
CKAP4-201ENST00000378026 IL13RA2Q14627 380 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 CLEC12BQ2HXU8 276 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 BEND4Q6ZU67 534 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 LANCL3Q6ZV70 420 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 FBXL14Q8N1E6 418 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 TMEM234Q8WY98 164 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 LYZL4Q96KX0 146 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 GNG13Q9P2W3 67 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 COL4A2P08572 1712 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 A0A1W2PQD3 144 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 ZFP92A6NM28 416 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 MMP9P14780 707 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 TLE1Q04724 770 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 SLC22A25Q6T423 547 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 KIAA1456Q9P272 454 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 PIGLQ9Y2B2 252 aa13.84□□□□□ -0.19
CKAP4-201ENST00000378026 CCDC85CA6NKD9 419 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 IFNA10P01566 189 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 EPHA1P21709 976 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 HLA-DRB3P79483 266 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 C1orf87Q8N0U7 546 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 GPR173Q9NS66 373 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 NECAP2Q9NVZ3 263 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 DOCK8Q8NF50 2099 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 A0A087WWC5 75 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 RPL36A-HNRNPH2H7BZ11 118 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 SPCS3P61009 180 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 LGI3Q8N145 548 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 PLPP5Q8NEB5 264 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 M1APQ8TC57 530 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 TP53RKQ96S44 253 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 MOB1AQ9H8S9 216 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF160Q9HCG1 818 aa13.83□□□□□ -0.2
CKAP4-201ENST00000378026 TUBG1P23258 451 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 CD200P41217 278 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 ECI1P42126 302 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 ZP4Q12836 540 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF266Q14584 549 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 UEVLDQ8IX04 471 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF664Q8N3J9 261 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 NECAP1Q8NC96 275 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 MSI2Q96DH6 328 aaKnown RBP13.82□□□□□ -0.2
CKAP4-201ENST00000378026 C18orf12Q96KH6 178 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 B3GAT1Q9P2W7 334 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 NCOA6Q14686 2063 aaPredicted RBP13.82□□□□□ -0.2
CKAP4-201ENST00000378026 TRANK1O15050 2925 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 PCDH15Q96QU1 1955 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 A0A1B0GW64 132 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 DYNLT3P51808 116 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 SMAD4Q13485 552 aaKnown RBP13.82□□□□□ -0.2
CKAP4-201ENST00000378026 MPV17LQ2QL34 196 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 CXorf66Q5JRM2 361 aaPredicted RBP13.82□□□□□ -0.2
CKAP4-201ENST00000378026 THEM4Q5T1C6 240 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 C5orf24Q7Z6I8 188 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 CMTM1Q8IZ96 169 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 FAM131CQ96AQ9 280 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 C2orf16Q68DN1 1984 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 C9J4A7 227 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 HSPA12AO43301 675 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 DDIT4LQ96D03 193 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 THOC3Q96J01 351 aaKnown RBP13.82□□□□□ -0.2
CKAP4-201ENST00000378026 IL23AQ9NPF7 189 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 GLRX2Q9NS18 164 aa13.82□□□□□ -0.2
CKAP4-201ENST00000378026 ASXL3Q9C0F0 2248 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 SHISA7A6NL88 538 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 VSTM2BA6NLU5 285 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 SOX15O60248 233 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 IGHG1P01857 330 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 THEGLP0DJG4 465 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 GALNSP34059 522 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 NKX2-1P43699 371 aaPredicted RBP13.81□□□□□ -0.2
CKAP4-201ENST00000378026 MTCP1P56278 107 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 VAMP2P63027 116 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 MYBPHQ13203 477 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 WDR25Q64LD2 544 aaPredicted RBP13.81□□□□□ -0.2
CKAP4-201ENST00000378026 SSC4DQ8WTU2 575 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 NKX2-4Q9H2Z4 354 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 SIRT7Q9NRC8 400 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 LIPT2A6NK58 231 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF814B7Z6K7 855 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 EFNA2O43921 213 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 GZMBP10144 247 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 DCAF7P61962 342 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 YPEL5P62699 121 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 OIT3Q8WWZ8 545 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 GABRG3Q99928 467 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 C2orf88Q9BSF0 95 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 CABLES2Q9BTV7 478 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 MRPL13Q9BYD1 178 aaKnown RBP13.81□□□□□ -0.2
CKAP4-201ENST00000378026 SMDT1Q9H4I9 107 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 CALHM2Q9HA72 323 aa13.81□□□□□ -0.2
CKAP4-201ENST00000378026 PNRC2Q9NPJ4 139 aaKnown RBP13.81□□□□□ -0.2
CKAP4-201ENST00000378026 H3BP45 60 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 EREGO14944 169 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms