RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 C11orf40Q8WZ69 217 aa13.67□□□□□ -0.22
CSNK1A1-202ENST00000377843 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
CSNK1A1-202ENST00000377843 SRD5A3Q9H8P0 318 aa13.67□□□□□ -0.22
CSNK1A1-202ENST00000377843 POLR3KQ9Y2Y1 108 aaPredicted RBP13.67□□□□□ -0.22
CSNK1A1-202ENST00000377843 C5orf63A6NC05 138 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 TMEM210A6NLX4 147 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 SLC31A1O15431 190 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 LINC01565O15544 149 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 IL33O95760 270 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 APODP05090 189 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 RRADP55042 308 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 PMS2P11Q13670 270 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 ZNF774Q6NX45 483 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 KLHL24Q6TFL4 600 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 SLC16A14Q7RTX9 510 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 OR11L1Q8NGX0 322 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 SSC4DQ8WTU2 575 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 TSACCQ96A04 125 aaPredicted RBP13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 DIRC2Q96SL1 478 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 TPSD1Q9BZJ3 242 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 OR8D2Q9GZM6 311 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 MED29Q9NX70 200 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 ZNF581Q9P0T4 197 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 GNG13Q9P2W3 67 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 NXT1Q9UKK6 140 aaKnown RBP13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 MT-ATP6P00846 226 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 LIAT1Q6ZQX7 453 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 C9orf40Q8IXQ3 194 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 NECAP1Q8NC96 275 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 CCDC3Q9BQI4 270 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 SDF2L1Q9HCN8 221 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 PRTFDC1Q9NRG1 225 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 MYOTQ9UBF9 498 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 VAX2Q9UIW0 290 aa13.66□□□□□ -0.22
CSNK1A1-202ENST00000377843 PROB1E7EW31 1015 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 RRP8O43159 456 aaKnown RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 METTL15P1P0C7V9 234 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 THEGLP0DJG4 465 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 TMEM225BP0DP42 221 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 ALDH3B1P43353 468 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 RPL29P47914 159 aaKnown RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 FXYD4P59646 89 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 GNB2P62879 340 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 IGLV3-21P80748 117 aaPredicted RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 GAGE1Q13065 139 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 METTL27Q8N6F8 245 aaPredicted RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 OR8B12Q8NGG6 310 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 FAAP24Q9BTP7 215 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 CHST11Q9NPF2 352 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 H0Y8X5 98 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 PITX3O75364 302 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 OPN1MWP04001 364 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 OPN1MW2P0DN77 364 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 OPN1MW3P0DN78 364 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 GNG10P50151 68 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 CLN3Q13286 438 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 ZNF266Q14584 549 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 CLEC12BQ2HXU8 276 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 MPV17LQ2QL34 196 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 ARSJQ5FYB0 599 aaPredicted RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 DMRTA1Q5VZB9 504 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 MAML2Q8IZL2 1156 aaPredicted RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 OR5C1Q8NGR4 320 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 ASB10Q8WXI3 467 aa13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 PHF3Q92576 2039 aaKnown RBP13.65□□□□□ -0.22
CSNK1A1-202ENST00000377843 BRWD1Q9NSI6 2320 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 TMED7-TICAM2A0A0A6YYA0 188 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 KIR2DL5BA0A0G2JN68 375 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 KIR2DL5BA0A0G2JPC4 375 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 E9PLN8 166 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 C5orf67F2Z3F1 127 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 MS4A18H0YCH9 400 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 CST7O76096 145 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 OR3A1P47881 315 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 MS4A18Q3C1V0 323 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 ZNF66Q6ZN08 573 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 FAM185AQ8N0U4 392 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 KIR2DL5AQ8N109 375 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 LRTM2Q8N967 370 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 KCNK17Q96T54 332 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 GPR173Q9NS66 373 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 COL6A3P12111 3177 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 CCDC163A0A0D9SF12 145 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 SLC33A1O00400 549 aaPredicted RBP13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 CA11O75493 328 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 RPLP1P05386 114 aaKnown RBP13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 IRF2P14316 349 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 OPRM1P35372 400 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 PDLIM4P50479 330 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 ERVS71-1P61550 626 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 TRA2AQ13595 282 aaKnown RBP eCLIP13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 MRPL41Q8IXM3 137 aaKnown RBP13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 CMTM1Q8IZ96 169 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 TMEM217Q8N7C4 229 aa13.64□□□□□ -0.23
CSNK1A1-202ENST00000377843 LIN37Q96GY3 246 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms