RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C1QL3Q5VWW1 255 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 TOMM20LQ6UXN7 152 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF429Q86V71 674 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 KCNK17Q96T54 332 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 SOX7Q9BT81 388 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 TRAF4Q9BUZ4 470 aaPredicted RBP9.6□□□□□ -0.87
HIF3A-205ENST00000377670 CLN8Q9UBY8 286 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 RCL1Q9Y2P8 373 aaKnown RBP9.6□□□□□ -0.87
HIF3A-205ENST00000377670 FCARP24071 287 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 CDAP32320 146 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 GNG3P63215 75 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 PMP22Q01453 160 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 C1QTNF12Q5T7M4 302 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 ASB13Q8WXK3 278 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 SIRT3Q9NTG7 399 aaPredicted RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 CYB5R1Q9UHQ9 305 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 A0A087WUJ7 227 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 J3QR89 54 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 PDLIM4P50479 330 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 SCMH1Q96GD3 660 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 ARHGDIGQ99819 225 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TTTY12Q9BZ98 90 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 MMP25Q9NPA2 562 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 RTTNQ86VV8 2226 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 GDF9O60383 454 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 PF4P02776 101 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 PTHLHP12272 177 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 CA6P23280 308 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 PEBP1P30086 187 aaKnown RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 LGALS7P47929 136 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 INSL4Q14641 139 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 GUK1Q16774 197 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 CBLN3Q6UW01 205 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 GMPPAQ96IJ6 420 aaPredicted RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 NXF2Q9GZY0 626 aaKnown RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 LCTP09848 1927 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 SERTM2A0A1B0GWG4 89 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TMEM30CPA0ZSE6 113 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 COTL1Q14019 142 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 UNQ6494/PRO21346Q6UXR6 183 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TMPRSS11FQ6ZWK6 438 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 ASCL5Q7RTU5 278 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 FAM24BQ8N5W8 94 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 OR4S1Q8NGB4 309 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 OR4D10Q8NGI6 311 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 GALMQ96C23 342 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 CXXC4Q9H2H0 198 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TREM2Q9NZC2 230 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 MMP24Q9Y5R2 645 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 RGPD3A6NKT7 1758 aaPredicted RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TMPRSS2O15393 492 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 OR5G3P0C626 314 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 PIGPP57054 158 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TMEM267Q0VDI3 215 aaPredicted RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 ZIC1Q15915 447 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 PRICKLE4Q2TBC4 344 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TIPARPQ7Z3E1 657 aaKnown RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 TUSC5Q8IXB3 177 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 CXorf58Q96LI9 332 aa9.59□□□□□ -0.87
HIF3A-205ENST00000377670 ZMAT5Q9UDW3 170 aaKnown RBP9.59□□□□□ -0.87
HIF3A-205ENST00000377670 SCN5AQ14524 2016 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 IL5P05113 134 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 GGNBP1Q5YKI7 109 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 KLHDC1Q8N7A1 406 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 DIRC2Q96SL1 478 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 CTDSP1Q9GZU7 261 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 RNF24Q9Y225 148 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 CT45A10P0DMU9 189 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 CRYBB2P43320 205 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 PTTG1IPP53801 180 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 EGR3Q06889 387 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 PABPC1L2AQ5JQF8 200 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 SLC22A18ASQ8N1D0 253 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 PELI1Q96FA3 418 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 DOK1Q99704 481 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 DNAJB12Q9NXW2 375 aaKnown RBP9.58□□□□□ -0.88
HIF3A-205ENST00000377670 OTOFQ9HC10 1997 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 TRAV1-2A0A0B4J238 106 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 FUT6P51993 359 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 SLC35B1P78383 322 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 ZNF117Q03924 483 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 TMEM229BQ8NBD8 167 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 CISD1Q9NZ45 108 aaKnown RBP9.58□□□□□ -0.88
HIF3A-205ENST00000377670 AHRRA9YTQ3 701 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 SEMA7AO75326 666 aa9.58□□□□□ -0.88
HIF3A-205ENST00000377670 TOMM34Q15785 309 aaPredicted RBP9.58□□□□□ -0.88
HIF3A-205ENST00000377670 TOX4O94842 621 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 WISP3O95389 354 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-205ENST00000377670 ZNF883P0CG24 379 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 SLC25A6P12236 298 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 PMCHP20382 165 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 GAB4Q2WGN9 574 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 NHLRC1Q6VVB1 395 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 ZNF66Q6ZN08 573 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 TMEM52Q8NDY8 209 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 GPX8Q8TED1 209 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 ST6GAL2Q96JF0 529 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
HIF3A-205ENST00000377670 THYN1Q9P016 225 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms