RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CTDSP1Q9GZU7 261 aa12.03□□□□□ -0.48
GPC6-201ENST00000377047 STARD6P59095 220 aa12.03□□□□□ -0.48
GPC6-201ENST00000377047 ZNF705AQ6ZN79 300 aaPredicted RBP12.03□□□□□ -0.48
GPC6-201ENST00000377047 OR8D4Q8NGM9 314 aa12.03□□□□□ -0.48
GPC6-201ENST00000377047 OR10Z1Q8NGY1 313 aa12.03□□□□□ -0.48
GPC6-201ENST00000377047 SLC25A40Q8TBP6 338 aa12.03□□□□□ -0.48
GPC6-201ENST00000377047 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
GPC6-201ENST00000377047 UQCC1Q9NVA1 299 aa12.03□□□□□ -0.48
GPC6-201ENST00000377047 GOLT1BQ9Y3E0 138 aa12.03□□□□□ -0.48
GPC6-201ENST00000377047 TRPM6Q9BX84 2022 aa12.02□□□□□ -0.48
GPC6-201ENST00000377047 IGHV3OR15-7A0A075B7D8 119 aa12.02□□□□□ -0.48
GPC6-201ENST00000377047 ACSM4P0C7M7 580 aa12.02□□□□□ -0.48
GPC6-201ENST00000377047 CHRDL1Q9BU40 450 aa12.02□□□□□ -0.48
GPC6-201ENST00000377047 NEU3Q9UQ49 428 aa12.02□□□□□ -0.48
GPC6-201ENST00000377047 CTAG2O75638 210 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 FFAR4Q5NUL3 377 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 CD300LDQ6UXZ3 194 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 CELA2AP08217 269 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 C21orf58P58505 322 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 TMEM52Q8NDY8 209 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 BCL2L2Q92843 193 aaPredicted RBP12.02□□□□□ -0.49
GPC6-201ENST00000377047 MS4A5Q9H3V2 200 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 CD37P11049 281 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 MRPS11P82912 194 aaKnown RBP12.02□□□□□ -0.49
GPC6-201ENST00000377047 CLEC12BQ2HXU8 276 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 BAP18Q8IXM2 172 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 C17orf47Q8NEP4 570 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 PECRQ9BY49 303 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 ZNF629Q9UEG4 869 aaPredicted RBP12.02□□□□□ -0.49
GPC6-201ENST00000377047 MRM2Q9UI43 246 aaKnown RBP12.02□□□□□ -0.49
GPC6-201ENST00000377047 FBXW9Q5XUX1 488 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 ADAM5Q6NVV9 412 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 ASCL5Q7RTU5 278 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 BLNKQ8WV28 456 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 DOK5Q9P104 306 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 NAGKQ9UJ70 344 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 POMT1Q9Y6A1 747 aa12.02□□□□□ -0.49
GPC6-201ENST00000377047 FNDC7Q5VTL7 733 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 ZDHHC22Q8N966 263 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 ZNF665Q9H7R5 613 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 PILRBQ9UKJ0 227 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 QSER1Q2KHR3 1735 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 OR2B8PP59922 312 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 KIAA0141Q14154 515 aaPredicted RBP12.01□□□□□ -0.49
GPC6-201ENST00000377047 MDP1Q86V88 176 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 NKX6-2Q9C056 277 aaPredicted RBP12.01□□□□□ -0.49
GPC6-201ENST00000377047 KCNK15Q9H427 330 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 OR1A1Q9P1Q5 309 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 CACNG5Q9UF02 275 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 FOCADQ5VW36 1801 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 IGHV1-45A0A0A0MS14 117 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 OOEPA6NGQ2 149 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 SLC38A11Q08AI6 406 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 ZNF260Q3ZCT1 412 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 SLC25A30Q5SVS4 291 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 INO80CQ6PI98 192 aaPredicted RBP12.01□□□□□ -0.49
GPC6-201ENST00000377047 PLSCR3Q9NRY6 295 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 DTX4Q9Y2E6 619 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 TMED3Q9Y3Q3 217 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 SLC25A5P05141 298 aaKnown RBP12.01□□□□□ -0.49
GPC6-201ENST00000377047 ZNF764Q96H86 408 aaPredicted RBP12.01□□□□□ -0.49
GPC6-201ENST00000377047 TMEM38BQ9NVV0 291 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 LANCL1O43813 399 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 GP1BAP07359 652 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 HMGA2P52926 109 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 LYZP61626 148 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 NCR3LG1Q68D85 454 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 NPTNQ9Y639 398 aa12.01□□□□□ -0.49
GPC6-201ENST00000377047 ANKRD34CP0C6C1 535 aa12□□□□□ -0.49
GPC6-201ENST00000377047 FCER1GP30273 86 aa12□□□□□ -0.49
GPC6-201ENST00000377047 CRYBB2P43320 205 aa12□□□□□ -0.49
GPC6-201ENST00000377047 FAM3AP98173 230 aa12□□□□□ -0.49
GPC6-201ENST00000377047 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
GPC6-201ENST00000377047 OR4D11Q8NGI4 311 aa12□□□□□ -0.49
GPC6-201ENST00000377047 GSX2Q9BZM3 304 aa12□□□□□ -0.49
GPC6-201ENST00000377047 G3V3Q6 166 aa12□□□□□ -0.49
GPC6-201ENST00000377047 DDA1Q9BW61 102 aa12□□□□□ -0.49
GPC6-201ENST00000377047 OPN3Q9H1Y3 402 aaPredicted RBP12□□□□□ -0.49
GPC6-201ENST00000377047 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
GPC6-201ENST00000377047 IGHA2P01877 340 aa12□□□□□ -0.49
GPC6-201ENST00000377047 ERVFC1-1P60608 527 aa12□□□□□ -0.49
GPC6-201ENST00000377047 CHCHD2P9Q5T1J5 151 aaPredicted RBP12□□□□□ -0.49
GPC6-201ENST00000377047 C19orf48Q6RUI8 117 aa12□□□□□ -0.49
GPC6-201ENST00000377047 OR52L2PQ8NGH6 319 aa12□□□□□ -0.49
GPC6-201ENST00000377047 MSL2Q9HCI7 577 aa12□□□□□ -0.49
GPC6-201ENST00000377047 MS4A18H0YCH9 400 aa12□□□□□ -0.49
GPC6-201ENST00000377047 BCL2L11O43521 198 aa12□□□□□ -0.49
GPC6-201ENST00000377047 OXA1LQ15070 435 aa12□□□□□ -0.49
GPC6-201ENST00000377047 MS4A18Q3C1V0 323 aa12□□□□□ -0.49
GPC6-201ENST00000377047 LSMEM1Q8N8F7 131 aa12□□□□□ -0.49
GPC6-201ENST00000377047 OR10AC1Q8NH08 325 aa12□□□□□ -0.49
GPC6-201ENST00000377047 OR4S2Q8NH73 311 aa12□□□□□ -0.49
GPC6-201ENST00000377047 HEXA-AS1Q9H8Q6 139 aa12□□□□□ -0.49
GPC6-201ENST00000377047 SLC25A22Q9H936 323 aa12□□□□□ -0.49
GPC6-201ENST00000377047 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
GPC6-201ENST00000377047 A0A1W2PPC1 479 aa12□□□□□ -0.49
GPC6-201ENST00000377047 PGA3P0DJD8 388 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms