RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 COMPP49747 757 aaPredicted RBP18.16■□□□□ 0.5
SRM-201ENST00000376957 UBE2E1P51965 193 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 EDDM3BP56851 147 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 PPP3R1P63098 170 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 ACSM1Q08AH1 577 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 KISS1Q15726 138 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 C16orf87Q6PH81 154 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 OR8H2Q8N162 312 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 BPIFB6Q8NFQ5 453 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 TFAP2CQ92754 450 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 SMIM19Q96E16 107 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 DPAGT1Q9H3H5 408 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 C19orf12Q9NSK7 152 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 CKLFQ9UBR5 152 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 ERGIC3Q9Y282 383 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 ZNF281Q9Y2X9 895 aa18.16■□□□□ 0.5
SRM-201ENST00000376957 FUOMA2VDF0 154 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 GNAO1P09471 354 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 BCL3P20749 454 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 GABRR1P24046 479 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 ZNF146Q15072 292 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 TMEM200BQ69YZ2 307 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 Q8N7P7 452 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 RFT1Q96AA3 541 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 RBFOX1Q9NWB1 397 aaKnown RBP18.15■□□□□ 0.5
SRM-201ENST00000376957 SCN3BQ9NY72 215 aa18.15■□□□□ 0.5
SRM-201ENST00000376957 MDFIC2A0A1B0GVS7 189 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 NPFFO15130 113 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 OGG1O15527 345 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 HKR1P10072 659 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 SOX2P48431 317 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 AHSA2Q719I0 299 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 SATL1Q86VE3 508 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 OR4M1Q8NGD0 313 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 TMEM106AQ96A25 262 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 HMG20AQ9NP66 347 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 EXOSC4Q9NPD3 245 aaKnown RBP18.14■□□□□ 0.49
SRM-201ENST00000376957 PSORS1C1Q9UIG5 152 aa18.14■□□□□ 0.49
SRM-201ENST00000376957 hADV38S2A0JD32 116 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 F8VVB4 439 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 F8VWA3 439 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 RNASEK-C17orf49H0YIS7 233 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 KDM4BO94953 1096 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 NPBWR2P48146 333 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 ERVFRD-1P60508 538 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 MEF2CQ06413 473 aaPredicted RBP18.13■□□□□ 0.49
SRM-201ENST00000376957 GRK1Q15835 563 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 YIF1BQ5BJH7 314 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 OR5D18Q8NGL1 313 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 FBLIM1Q8WUP2 373 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 THRSPQ92748 146 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 MYDGFQ969H8 173 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 SPACA5Q96QH8 159 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 S100A13Q99584 98 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 TMEM138Q9NPI0 162 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 NKX1-2Q9UD57 310 aaPredicted RBP18.13■□□□□ 0.49
SRM-201ENST00000376957 GSTK1Q9Y2Q3 226 aa18.13■□□□□ 0.49
SRM-201ENST00000376957 SOX21Q9Y651 276 aaPredicted RBP18.13■□□□□ 0.49
SRM-201ENST00000376957 A0A0U1RQK1 487 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 MEIOCA2RUB1 952 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 ANGPTL7O43827 346 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 XPNPEP2O43895 674 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 MELTFP08582 738 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 LGALS4P56470 323 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 RPL15P61313 204 aaKnown RBP18.12■□□□□ 0.49
SRM-201ENST00000376957 MIDNQ504T8 468 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 CHST4Q8NCG5 386 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 GHSRQ92847 366 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 C1orf147Q96MC9 270 aaPredicted RBP18.12■□□□□ 0.49
SRM-201ENST00000376957 PCDHB16Q9NRJ7 776 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 CLEC2DQ9UHP7 191 aa18.12■□□□□ 0.49
SRM-201ENST00000376957 MGST3O14880 152 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 ZNF737O75373 536 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 RBP4P02753 201 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 HSPA13P48723 471 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 MTNR1BP49286 362 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 SNU13P55769 128 aaKnown RBP18.11■□□□□ 0.49
SRM-201ENST00000376957 WNT4P56705 351 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 EDDM3AQ14507 147 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 XAF1Q6GPH4 301 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 LDLRAD3Q86YD5 345 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 PIP4P2Q8N4L2 257 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 RPS4Y2Q8TD47 263 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 TNFRSF19Q9NS68 423 aa18.11■□□□□ 0.49
SRM-201ENST00000376957 PAK1IP1Q9NWT1 392 aaPredicted RBP18.11■□□□□ 0.49
SRM-201ENST00000376957 ALDOBP05062 364 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 ZNF44P15621 663 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 DUSP1P28562 367 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 SCN1BQ07699 218 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 RSU1Q15404 277 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 Q499Y3 187 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 DMKNQ6E0U4 476 aaPredicted RBP18.1■□□□□ 0.49
SRM-201ENST00000376957 PXT1Q8NFP0 134 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 DYRK2Q92630 601 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 TNFRSF14Q92956 283 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 FAM192AQ9GZU8 254 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 TAS2R4Q9NYW5 299 aa18.1■□□□□ 0.49
SRM-201ENST00000376957 A0A1W2PRD5 423 aa18.09■□□□□ 0.49
SRM-201ENST00000376957 A0A1W2PRF3 423 aa18.09■□□□□ 0.49
SRM-201ENST00000376957 A0A1W2PRM7 423 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms