RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZFP92A6NM28 416 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 ABCD4O14678 606 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 GALR2O43603 387 aaPredicted RBP15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 SCAND1P57086 179 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 C19orf57Q0VDD7 668 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 TMEM182Q6ZP80 229 aaPredicted RBP15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 FAM214BQ7L5A3 538 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 NUFIP2Q7Z417 695 aaKnown RBP15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 TMEM104Q8NE00 496 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 SCARB1Q8WTV0 552 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 PSG11Q9UQ72 335 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 FAM208BQ5VWN6 2430 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 SPG11Q96JI7 2443 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 IL5P05113 134 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 ADRA2CP18825 462 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 CHRNB4P30926 498 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 LIN7CQ9NUP9 197 aaKnown RBP15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 NME2P1O60361 137 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 HPXP02790 462 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 HDHD3Q9BSH5 251 aaPredicted RBP15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 CHST5Q9GZS9 411 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 FER1L5A0AVI2 2057 aa15.71■□□□□ 0.11
PTPDC1-202ENST00000375360 PIN1P1O15428 100 aa15.71■□□□□ 0.1
PTPDC1-202ENST00000375360 ADRB1P08588 477 aa15.71■□□□□ 0.1
PTPDC1-202ENST00000375360 MRPL14Q6P1L8 145 aaKnown RBP15.71■□□□□ 0.1
PTPDC1-202ENST00000375360 FRZBQ92765 325 aa15.71■□□□□ 0.1
PTPDC1-202ENST00000375360 EXOSC2Q13868 293 aaKnown RBP15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 SLC25A47Q6Q0C1 308 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 SLC36A1Q7Z2H8 476 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 PINX1Q96BK5 328 aaKnown RBP15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 OPN3Q9H1Y3 402 aaPredicted RBP15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 KLF4O43474 513 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 UMODP07911 640 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 OR8U8P0C7N1 319 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 RBMXL3Q8N7X1 1067 aaKnown RBP15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 NDUFB3O43676 98 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 CXCL3P19876 107 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 BCL3P20749 454 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 ZBTB25P24278 435 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 FPR2P25090 351 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 SOHLH1Q5JUK2 328 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 LYG1Q8N1E2 194 aa15.7■□□□□ 0.1
PTPDC1-202ENST00000375360 A0A0G2JMM0 328 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 A0A1W2PPB8 328 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 A0A1W2PRS3 328 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 KIR3DP1A8MWS1 328 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 DFFBO76075 338 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 TLE4Q04727 773 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 ZNF528Q3MIS6 628 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 LCN15Q6UWW0 184 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 FAM219AQ8IW50 185 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 PPP1R3EQ9H7J1 279 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 ANXA10Q9UJ72 324 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 ROM1Q03395 351 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 PDZK1IP1Q13113 114 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 ESCO2Q56NI9 601 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 FAM122BQ7Z309 247 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 ZNF519Q8TB69 540 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 TMEM231Q9H6L2 316 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 ZNF883P0CG24 379 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 BAP18Q8IXM2 172 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 DUSP18Q8NEJ0 188 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 IMMP1LQ96LU5 166 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 SSUH2Q9Y2M2 353 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 PCDHGA9Q9Y5G4 932 aaKnown RBP15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 E5RGE8 158 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 TGM6O95932 706 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 PDGFAP04085 211 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 GNB2P62879 340 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 MOGAT3Q86VF5 341 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 COMMD5Q9GZQ3 224 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 SAV1Q9H4B6 383 aaPredicted RBP15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 NSG2Q9Y328 171 aa15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 SF3B6Q9Y3B4 125 aaKnown RBP15.69■□□□□ 0.1
PTPDC1-202ENST00000375360 THNSL2Q86YJ6 484 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 ZDHHC22Q8N966 263 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 IGKV1D-43A0A0B4J1Z2 117 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 JTBO76095 146 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 AK3Q9UIJ7 227 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 C9orf170A2RU37 121 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 PPIHO43447 177 aaKnown RBP15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 ICMTO60725 284 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 YIF1AO95070 293 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 ONECUT2O95948 504 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 SLC38A6Q8IZM9 456 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 ARV1Q9H2C2 271 aa15.68■□□□□ 0.1
PTPDC1-202ENST00000375360 C9orf172C9J069 976 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 C17orf112F2Z3M2 114 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 OR5AC1P0C628 307 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 CHATP28329 748 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 RAB5BP61020 215 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 NFAM1Q8NET5 270 aaPredicted RBP15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 TMPRSS2O15393 492 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 ADAM20O43506 726 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 CRYZL1O95825 349 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 FOXO1Q12778 655 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 LRRC10Q5BKY1 277 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 TCTE3Q8IZS6 198 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 MARC2Q969Z3 335 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 GPR27Q9NS67 375 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms