RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TUBG1P23258 451 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 IDH3GP51553 393 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 SOX8P57073 446 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 GNB2P62879 340 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 RAC1P63000 192 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CMTM1Q8IZ96 169 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 GPR119Q8TDV5 335 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 GNPNAT1Q96EK6 184 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 NAA60Q9H7X0 242 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CENPMQ9NSP4 180 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 FAM206AQ9NX38 181 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 TCRBV21S2A2A0A5A6 115 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 IGSF23A1L1A6 192 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 GPR89AB7ZAQ6 455 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 GPR89BP0CG08 455 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CT45A8P0DMV1 189 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CT45A9P0DMV2 189 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 SLC37A1P57057 533 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 FAM3BP58499 235 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 BATFQ16520 125 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CT45A2Q5DJT8 189 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 DEGS2Q6QHC5 323 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF100Q8IYN0 542 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 TMEM171Q8WVE6 324 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 TIMM29Q9BSF4 260 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 MBNL1Q9NR56 388 aaKnown RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CISD1Q9NZ45 108 aaKnown RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 WNT6Q9Y6F9 365 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF705FA8MVS1 300 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 HPNP05981 417 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF705DP0CH99 300 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF705BP0CI00 300 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CCR2P41597 374 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 ERVS71-1P61550 626 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 PDGFRLQ15198 375 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 NUFIP2Q7Z417 695 aaKnown RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 CA13Q8N1Q1 262 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 C11orf42Q8N5U0 333 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 OR51T1Q8NGJ9 327 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 PTPMT1Q8WUK0 201 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 TBX15Q96SF7 602 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 C20orf144Q9BQM9 153 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF701Q9NV72 531 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 FUT9Q9Y231 359 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 BDP1A6H8Y1 2624 aa11.27□□□□□ -0.6
PRPF4-201ENST00000374198 TRAV1-1A0A0B4J248 108 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 RRP8O43159 456 aaKnown RBP11.27□□□□□ -0.61
PRPF4-201ENST00000374198 UMODP07911 640 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 JMJD7P0C870 316 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 ZNF20P17024 532 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 OMGP23515 440 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 CDKN1BP46527 198 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 ACOT6Q3I5F7 207 aaPredicted RBP11.27□□□□□ -0.61
PRPF4-201ENST00000374198 ACTL10Q5JWF8 245 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 COL5A1-AS1Q5SY13 56 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 FNDC7Q5VTL7 733 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 ARMC6Q6NXE6 501 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 DPPA3Q6W0C5 159 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 SSX7Q7RTT5 188 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 RABEPKQ7Z6M1 372 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 OR5AS1Q8N127 324 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 NECAP1Q8NC96 275 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 OR1N1Q8NGS0 311 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 WFIKKN1Q96NZ8 548 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 ELOVL1Q9BW60 279 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 PBOV1Q9GZY1 135 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 TXNIPQ9H3M7 391 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 C11orf1Q9H5F2 150 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 KIR3DX1Q9H7L2 352 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 C5orf42Q9H799 3197 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 POU2F2P09086 479 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 WNT5AP41221 380 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 P2RY2P41231 377 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 OR4D5Q8NGN0 318 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 RTN4IP1Q8WWV3 396 aaPredicted RBP11.27□□□□□ -0.61
PRPF4-201ENST00000374198 KLHDC3Q9BQ90 382 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 PECRQ9BY49 303 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 MSL2Q9HCI7 577 aa11.27□□□□□ -0.61
PRPF4-201ENST00000374198 COL4A2P08572 1712 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 CISD3P0C7P0 127 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 BCL2P10415 239 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 CEACAM1P13688 526 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
PRPF4-201ENST00000374198 TFPI2P48307 235 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 RAB7AP51149 207 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 RUNX1Q01196 453 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 ELAVL3Q14576 367 aaKnown RBP11.26□□□□□ -0.61
PRPF4-201ENST00000374198 ARL6IP1Q15041 203 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 HNRNPA1L2Q32P51 320 aaKnown RBP11.26□□□□□ -0.61
PRPF4-201ENST00000374198 POMZP3Q6PJE2 187 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 LGI3Q8N145 548 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 GPR35Q9HC97 309 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 ARID1BQ8NFD5 2236 aaPredicted RBP11.26□□□□□ -0.61
PRPF4-201ENST00000374198 ZFP92A6NM28 416 aa11.26□□□□□ -0.61
PRPF4-201ENST00000374198 FOXI3A8MTJ6 420 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms