RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ANKRD55Q3KP44 614 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 P2RY12Q9H244 342 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 C12orf49Q9H741 205 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 TMEM210A6NLX4 147 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 PABPC1L2AQ5JQF8 200 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 OR11H7Q8NGC8 314 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 OCIAD1Q9NX40 245 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 WSB2Q9NYS7 404 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-201ENST00000371817 METTL1Q9UBP6 276 aaKnown RBP13.69□□□□□ -0.22
COL5A1-201ENST00000371817 SGMS2Q8NHU3 365 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 ARHGAP5-AS1Q96IT6 56 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 GTF3C1Q12789 2109 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 CLDN15P56746 228 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 UBE2L3P68036 154 aaKnown RBP13.69□□□□□ -0.22
COL5A1-201ENST00000371817 DCDP81605 110 aaKnown RBP13.69□□□□□ -0.22
COL5A1-201ENST00000371817 SYT11Q9BT88 431 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 MMACHCQ9Y4U1 282 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 DSCR3O14972 297 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 KIR2DS2P43631 304 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 TEX30Q5JUR7 227 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 TMPRSS13Q9BYE2 586 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 OR2W1Q9Y3N9 320 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 CDS2O95674 445 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 ATF1P18846 271 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 JOSD1Q15040 202 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-201ENST00000371817 CCL14Q16627 93 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 PERPQ96FX8 193 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 PMCHL2Q9BQD1 86 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 CES1P1Q9UKY3 287 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 M0R296 226 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 POLR2AP24928 1970 aaKnown RBP13.68□□□□□ -0.22
COL5A1-201ENST00000371817 A0A1W2PPC4 97 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 FUT3P21217 361 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 ZNF502Q8TBZ5 544 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 PAAF1Q9BRP4 392 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 TMEM204Q9BSN7 226 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 C1SP09871 688 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 TIMD4Q96H15 378 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 GAL3ST2Q9H3Q3 398 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 KCNK7Q9Y2U2 307 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 LOC389332A0A1B0GUA5 103 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 ANKRD20A5PA0PJZ0 165 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 RER1O15258 196 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 SRSF10O75494 262 aaKnown RBP13.68□□□□□ -0.22
COL5A1-201ENST00000371817 MORN1Q5T089 497 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 HIST1H1DP16402 221 aaKnown RBP13.68□□□□□ -0.22
COL5A1-201ENST00000371817 ABHD1Q96SE0 405 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 ALKBH7Q9BT30 221 aaPredicted RBP13.68□□□□□ -0.22
COL5A1-201ENST00000371817 WIPI2Q9Y4P8 454 aa13.68□□□□□ -0.22
COL5A1-201ENST00000371817 DOCK5Q9H7D0 1870 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 HES3Q5TGS1 186 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 FNDC7Q5VTL7 733 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 SPRYD7Q5W111 196 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 ADAP1O75689 374 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 CXorf1O96002 111 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 ABHD17CQ6PCB6 329 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 OR1B1Q8NGR6 318 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 IL19Q9UHD0 177 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 ST6GAL1P15907 406 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 SIGLEC11Q96RL6 698 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 TMEM70Q9BUB7 260 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 MBNL1Q9NR56 388 aaKnown RBP13.67□□□□□ -0.22
COL5A1-201ENST00000371817 ANXA10Q9UJ72 324 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 CTDSPLO15194 276 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 F12P00748 615 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-201ENST00000371817 RPS23P62266 143 aaKnown RBP13.67□□□□□ -0.22
COL5A1-201ENST00000371817 ZNF750Q32MQ0 723 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 LRRC75AQ8NAA5 344 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 TRGV10A0A0A0MS01 117 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 CYB5R3P00387 301 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-201ENST00000371817 MRPL58Q14197 206 aaKnown RBP13.67□□□□□ -0.22
COL5A1-201ENST00000371817 MAJINQ3KP22 176 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 OLIG3Q7RTU3 272 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 PHOSPHO2Q8TCD6 241 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 DEFB133Q30KQ1 61 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 ALG14Q96F25 216 aa13.67□□□□□ -0.22
COL5A1-201ENST00000371817 C11orf68Q9H3H3 251 aaKnown RBP13.67□□□□□ -0.22
COL5A1-201ENST00000371817 UBE2ZQ9H832 354 aaPredicted RBP13.67□□□□□ -0.22
COL5A1-201ENST00000371817 TMEM30CPA0ZSE6 113 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 SIGLEC5O15389 551 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 MT-ND6P03923 174 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 TMEM255AQ5JRV8 349 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 SGK494Q96LW2 274 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 FOCADQ5VW36 1801 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 PQLC2LA1A4F0 135 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 KCNAB3O43448 404 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 SMIM13P0DJ93 91 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 CEACAM6P40199 344 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 LIM2P55344 173 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 RELBQ01201 579 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 OR13G1Q8NGZ3 307 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 CLEC5AQ9NY25 188 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 KCND3Q9UK17 655 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 FOLR2P14207 255 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 ZNF260Q3ZCT1 412 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 PARS2Q7L3T8 475 aaKnown RBP13.66□□□□□ -0.22
COL5A1-201ENST00000371817 TAAR3PQ9P1P4 343 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms