RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 CST9Q5W186 159 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 OR5R1Q8NH85 324 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 PIGCQ92535 297 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 FAM122AQ96E09 287 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 GFI1Q99684 422 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 HDHD3Q9BSH5 251 aaPredicted RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 R4GMQ9 66 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 A0A1B0GTI1 187 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 PRSS37A4D1T9 235 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 BMPR1BO00238 502 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 SOD2P04179 222 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 GAPDHP04406 335 aaKnown RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 KIAA1644Q3SXP7 199 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 TMEM156Q8N614 296 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 UBALD1Q8TB05 177 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 RPS4Y2Q8TD47 263 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 ZNF430Q9H8G1 570 aaPredicted RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 NAT8Q9UHE5 227 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 GPR132Q9UNW8 380 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 HDGFL3Q9Y3E1 203 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 DUXBA0A1W2PPF3 345 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 ARPC3O15145 178 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 PNLIPP16233 465 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 CTLA4P16410 223 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 ZNF43P17038 809 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 EGR1P18146 543 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 DLX2Q07687 328 aaPredicted RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 UHRF2Q96PU4 802 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 TMEM204Q9BSN7 226 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 VN1R3Q9BXE9 311 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 IGFLR1Q9H665 355 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 IL19Q9UHD0 177 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 OTOL1A6NHN0 477 aaPredicted RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 CHST1O43916 411 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 OTX1P32242 354 aaPredicted RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 KIR3DL2P43630 455 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 IER3P46695 156 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 FASLGP48023 281 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 ZXDAP98168 799 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 RUNX2Q13950 521 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 CDCP2Q5VXM1 449 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 WDR74Q6RFH5 385 aaPredicted RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 CLEC2AQ6UVW9 174 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 UNQ5815/PRO19632Q6UWF5 114 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 SLC35E3Q7Z769 313 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 PBOV1Q9GZY1 135 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 LPAR2Q9HBW0 351 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 CYTL1Q9NRR1 136 aa10.42□□□□□ -0.74
PTPN1-201ENST00000371621 FOXD3Q9UJU5 478 aaPredicted RBP10.42□□□□□ -0.74
PTPN1-201ENST00000371621 FREM3P0C091 2139 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 DEDDO75618 318 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 GUSBP08236 651 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 GABRA6Q16445 453 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 CNKSR3Q6P9H4 555 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 TEX38Q6PEX7 206 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 CBLN3Q6UW01 205 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 UNQ9370/PRO34162Q6UXP9 181 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 GKN2Q86XP6 184 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 OR5D13Q8NGL4 314 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTPN1-201ENST00000371621 ERRFI1Q9UJM3 462 aaPredicted RBP10.41□□□□□ -0.74
PTPN1-201ENST00000371621 MKI67P46013 3256 aaKnown RBP10.41□□□□□ -0.74
PTPN1-201ENST00000371621 A0A087WUJ7 227 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 VIPR2P41587 438 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 BTG2P78543 158 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 MST1LQ2TV78 715 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 TMEM176BQ3YBM2 270 aaPredicted RBP10.41□□□□□ -0.74
PTPN1-201ENST00000371621 WDR5BQ86VZ2 330 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 ZNF611Q8N823 705 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 SLC24A4Q8NFF2 622 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 GPBAR1Q8TDU6 330 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 MCTS1Q9ULC4 181 aaKnown RBP10.41□□□□□ -0.74
PTPN1-201ENST00000371621 SPRY1O43609 319 aaPredicted RBP10.41□□□□□ -0.74
PTPN1-201ENST00000371621 MT-CO2P00403 227 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 FAHP16930 419 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 SCAND1P57086 179 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 SPRED2Q7Z698 418 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 MRGPREQ86SM8 312 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 BMPERQ8N8U9 685 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 ABHD5Q8WTS1 349 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 TMEM234Q8WY98 164 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 ANKRD9Q96BM1 317 aaPredicted RBP10.41□□□□□ -0.74
PTPN1-201ENST00000371621 MRGPRX4Q96LA9 322 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 NEU1Q99519 415 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 VAX2Q9UIW0 290 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 MTCH2Q9Y6C9 303 aa10.41□□□□□ -0.74
PTPN1-201ENST00000371621 DOCK3Q8IZD9 2030 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 NKX2-6A6NCS4 301 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 VSTM2BA6NLU5 285 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 F8VVB4 439 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 F8VWA3 439 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 WDR1O75083 606 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 UPK3AO75631 287 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 LINC00614P0C842 121 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 THBS3P49746 956 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 EIF4EBP2Q13542 120 aaPredicted RBP10.4□□□□□ -0.74
PTPN1-201ENST00000371621 PNLIPRP3Q17RR3 467 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 ZNF684Q5T5D7 378 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 PRSS41Q7RTY9 318 aa10.4□□□□□ -0.74
PTPN1-201ENST00000371621 HOGA1Q86XE5 327 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms