RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 HAND1O96004 215 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 OPN1MWP04001 364 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 OPN1MW2P0DN77 364 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 OPN1MW3P0DN78 364 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 PIPP12273 146 aaPredicted RBP13.07□□□□□ -0.32
VMA21-202ENST00000370361 AZGP1P25311 298 aaKnown RBP13.07□□□□□ -0.32
VMA21-202ENST00000370361 CCR9P51686 369 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 OR12D2P58182 307 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 SNRPGP62308 76 aaKnown RBP13.07□□□□□ -0.32
VMA21-202ENST00000370361 ACTA2P62736 377 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 ACTG2P63267 376 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 IL18R1Q13478 541 aa13.07□□□□□ -0.32
VMA21-202ENST00000370361 DSCAML1Q8TD84 2053 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 MGST3O14880 152 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 MT-ND2P03891 347 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 ZNF20P17024 532 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 ARHGDIBP52566 201 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 ZNF91Q05481 1191 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 ODF4Q2M2E3 257 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 OR52W1Q6IF63 320 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 ZNF782Q6ZMW2 699 aaPredicted RBP13.06□□□□□ -0.32
VMA21-202ENST00000370361 FAM58AQ8N1B3 248 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 PRSS35Q8N3Z0 413 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 KLHDC1Q8N7A1 406 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 OR2G2Q8NGZ5 317 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 PIFOQ8TCI5 191 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 HAVCR2Q8TDQ0 301 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 SLAMF9Q96A28 289 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 UBE2J1Q9Y385 318 aaPredicted RBP13.06□□□□□ -0.32
VMA21-202ENST00000370361 SESN1Q9Y6P5 492 aa13.06□□□□□ -0.32
VMA21-202ENST00000370361 IGKV1-27A0A075B6S5 117 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 SLC16A6O15403 523 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 ENTPD6O75354 484 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 OCM2P0CE71 109 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 OCMP0CE72 109 aaPredicted RBP13.05□□□□□ -0.32
VMA21-202ENST00000370361 GABRB1P18505 474 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 ATF1P18846 271 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 GABRR1P24046 479 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 MTCP1P56278 107 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 ZNF85Q03923 595 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 EMX1Q04741 257 aaPredicted RBP13.05□□□□□ -0.32
VMA21-202ENST00000370361 MRPL28Q13084 256 aaKnown RBP13.05□□□□□ -0.32
VMA21-202ENST00000370361 GRK1Q15835 563 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 FAM189A2Q15884 450 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 C16orf82Q7Z2V1 217 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 RTN4RL2Q86UN3 420 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 SAXO1Q8IYX7 474 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 FAM110DQ8TAY7 271 aaPredicted RBP13.05□□□□□ -0.32
VMA21-202ENST00000370361 CREB3L1Q96BA8 519 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 AKR1E2Q96JD6 320 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 CLEC7AQ9BXN2 247 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 PRSS22Q9GZN4 317 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 GAL3ST2Q9H3Q3 398 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 HHLA2Q9UM44 414 aa13.05□□□□□ -0.32
VMA21-202ENST00000370361 DAPL1A0PJW8 107 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 MEGF11A6BM72 1044 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 A6NDX4 124 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 SH2D1BO14796 132 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 CHST1O43916 411 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 BAG2O95816 211 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 KIR3DL2P43630 455 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 SSX2Q16385 188 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 ZSCAN26Q16670 478 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 REC114Q7Z4M0 266 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 LHFPL4Q7Z7J7 247 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 ACBD7Q8N6N7 88 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 ZNF676Q8N7Q3 588 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 CHST4Q8NCG5 386 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 OR4S1Q8NGB4 309 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 STMN2Q93045 179 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 CPNE2Q96FN4 548 aaPredicted RBP13.04□□□□□ -0.32
VMA21-202ENST00000370361 OPALINQ96PE5 141 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 GMPPBQ9Y5P6 360 aa13.04□□□□□ -0.32
VMA21-202ENST00000370361 IGHV2-26A0A0B4J1V2 119 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 TMEM82A0PJX8 343 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 F8VVB4 439 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 F8VWA3 439 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 J3QRE1 110 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 F2RL2O00254 374 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 XPNPEP2O43895 674 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 MPZL2O60487 215 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 PEX14O75381 377 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 FBXO24O75426 580 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 ALX3O95076 343 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 CSN2P05814 226 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 HTR1AP08908 422 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 POU3F4P49335 361 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 P2RX3P56373 397 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 PDZK1IP1Q13113 114 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 DYNC1I2Q13409 638 aaKnown RBP13.03□□□□□ -0.32
VMA21-202ENST00000370361 EDDM3AQ14507 147 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 TP53I3Q53FA7 332 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 NDUFA11Q86Y39 141 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 BATF2Q8N1L9 274 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 ZNF596Q8TC21 504 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 RNFT2Q96EX2 444 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
VMA21-202ENST00000370361 NKX3-1Q99801 234 aaPredicted RBP13.03□□□□□ -0.32
VMA21-202ENST00000370361 TMEM133Q9H2Q1 129 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 ZNF702PQ9H963 129 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms