RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 RTN4IP1Q8WWV3 396 aaPredicted RBP8.84□□□□□ -0.99
TPM3-209ENST00000368527 ZNF75AQ96N20 296 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 PRRX2Q99811 253 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 SULT4A1Q9BR01 284 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 RSRP1Q9BUV0 290 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 TTTY12Q9BZ98 90 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 SLC5A7Q9GZV3 580 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 WDR13Q9H1Z4 485 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 ZNF442Q9H7R0 627 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 CYTL1Q9NRR1 136 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 SLC7A10Q9NS82 523 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 LPAR3Q9UBY5 353 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 GPR160Q9UJ42 338 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 PCDHB10Q9UN67 800 aa8.84□□□□□ -0.99
TPM3-209ENST00000368527 COL27A1Q8IZC6 1860 aaPredicted RBP8.83□□□□□ -1
TPM3-209ENST00000368527 TRBV6-6A0A0A6YYG2 114 aa8.83□□□□□ -1
TPM3-209ENST00000368527 LNP1A1A4G5 178 aa8.83□□□□□ -1
TPM3-209ENST00000368527 PINLYPA6NC86 204 aa8.83□□□□□ -1
TPM3-209ENST00000368527 ANKRD30BLA7E2S9 258 aa8.83□□□□□ -1
TPM3-209ENST00000368527 H0YIZ8 118 aa8.83□□□□□ -1
TPM3-209ENST00000368527 TRAPPC2LH3BP13 241 aa8.83□□□□□ -1
TPM3-209ENST00000368527 GEMIN2O14893 280 aaKnown RBP8.83□□□□□ -1
TPM3-209ENST00000368527 ANGPTL7O43827 346 aa8.83□□□□□ -1
TPM3-209ENST00000368527 CDS2O95674 445 aa8.83□□□□□ -1
TPM3-209ENST00000368527 TK1P04183 234 aa8.83□□□□□ -1
TPM3-209ENST00000368527 HOXB5P09067 269 aa8.83□□□□□ -1
TPM3-209ENST00000368527 HOXB1P14653 301 aaPredicted RBP8.83□□□□□ -1
TPM3-209ENST00000368527 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
TPM3-209ENST00000368527 APLNRP35414 380 aa8.83□□□□□ -1
TPM3-209ENST00000368527 P2RY1P47900 373 aa8.83□□□□□ -1
TPM3-209ENST00000368527 RAB5CP51148 216 aa8.83□□□□□ -1
TPM3-209ENST00000368527 S100A10P60903 97 aa8.83□□□□□ -1
TPM3-209ENST00000368527 HGFACQ04756 655 aa8.83□□□□□ -1
TPM3-209ENST00000368527 MRPL49Q13405 166 aaKnown RBP8.83□□□□□ -1
TPM3-209ENST00000368527 TMEM187Q14656 261 aa8.83□□□□□ -1
TPM3-209ENST00000368527 SLC10A1Q14973 349 aa8.83□□□□□ -1
TPM3-209ENST00000368527 GGNBP1Q5YKI7 109 aa8.83□□□□□ -1
TPM3-209ENST00000368527 SPINK14Q6IE38 97 aa8.83□□□□□ -1
TPM3-209ENST00000368527 SLC22A25Q6T423 547 aa8.83□□□□□ -1
TPM3-209ENST00000368527 NUFIP2Q7Z417 695 aaKnown RBP8.83□□□□□ -1
TPM3-209ENST00000368527 Q8IYB0 196 aa8.83□□□□□ -1
TPM3-209ENST00000368527 TMEM178AQ8NBL3 297 aa8.83□□□□□ -1
TPM3-209ENST00000368527 IL22RA2Q969J5 263 aa8.83□□□□□ -1
TPM3-209ENST00000368527 ZNF775Q96BV0 537 aaPredicted RBP8.83□□□□□ -1
TPM3-209ENST00000368527 OR10C1Q96KK4 312 aa8.83□□□□□ -1
TPM3-209ENST00000368527 PKIBQ9C010 78 aa8.83□□□□□ -1
TPM3-209ENST00000368527 IFT22Q9H7X7 185 aa8.83□□□□□ -1
TPM3-209ENST00000368527 GSKIPQ9P0R6 139 aa8.83□□□□□ -1
TPM3-209ENST00000368527 RCC2Q9P258 522 aaKnown RBP8.83□□□□□ -1
TPM3-209ENST00000368527 BDP1A6H8Y1 2624 aa8.83□□□□□ -1
TPM3-209ENST00000368527 EML6Q6ZMW3 1958 aa8.82□□□□□ -1
TPM3-209ENST00000368527 IGKV1-12A0A0C4DH73 117 aa8.82□□□□□ -1
TPM3-209ENST00000368527 TMEM218A2RU14 115 aa8.82□□□□□ -1
TPM3-209ENST00000368527 GPR137BO60478 399 aa8.82□□□□□ -1
TPM3-209ENST00000368527 IGKV1D-12P01611 117 aa8.82□□□□□ -1
TPM3-209ENST00000368527 WNT2P09544 360 aa8.82□□□□□ -1
TPM3-209ENST00000368527 HKR1P10072 659 aa8.82□□□□□ -1
TPM3-209ENST00000368527 EDN3P14138 238 aa8.82□□□□□ -1
TPM3-209ENST00000368527 MMP9P14780 707 aa8.82□□□□□ -1
TPM3-209ENST00000368527 PI3P19957 117 aa8.82□□□□□ -1
TPM3-209ENST00000368527 PVALBP20472 110 aaPredicted RBP8.82□□□□□ -1
TPM3-209ENST00000368527 TUBG1P23258 451 aa8.82□□□□□ -1
TPM3-209ENST00000368527 FCGR2CP31995 323 aa8.82□□□□□ -1
TPM3-209ENST00000368527 SULT1A2P50226 295 aa8.82□□□□□ -1
TPM3-209ENST00000368527 PJVKQ0ZLH3 352 aa8.82□□□□□ -1
TPM3-209ENST00000368527 PRDX4Q13162 271 aa8.82□□□□□ -1
TPM3-209ENST00000368527 HMGN3Q15651 99 aa8.82□□□□□ -1
TPM3-209ENST00000368527 BEX5Q5H9J7 111 aa8.82□□□□□ -1
TPM3-209ENST00000368527 TCEAL6Q6IPX3 200 aa8.82□□□□□ -1
TPM3-209ENST00000368527 UNQ6126/PRO20091Q6UXV3 157 aa8.82□□□□□ -1
TPM3-209ENST00000368527 SLC25A26Q70HW3 274 aa8.82□□□□□ -1
TPM3-209ENST00000368527 MOB1BQ7L9L4 216 aa8.82□□□□□ -1
TPM3-209ENST00000368527 RTN4RL2Q86UN3 420 aa8.82□□□□□ -1
TPM3-209ENST00000368527 TMEM251Q8N6I4 163 aa8.82□□□□□ -1
TPM3-209ENST00000368527 ZFP62Q8NB50 900 aaPredicted RBP8.82□□□□□ -1
TPM3-209ENST00000368527 UBAC2Q8NBM4 344 aa8.82□□□□□ -1
TPM3-209ENST00000368527 MDS2Q8NDY4 140 aa8.82□□□□□ -1
TPM3-209ENST00000368527 OR56B2PQ8NGI1 322 aa8.82□□□□□ -1
TPM3-209ENST00000368527 ZNF845Q96IR2 970 aaPredicted RBP8.82□□□□□ -1
TPM3-209ENST00000368527 SMIM8Q96KF7 97 aa8.82□□□□□ -1
TPM3-209ENST00000368527 C18orf12Q96KH6 178 aa8.82□□□□□ -1
TPM3-209ENST00000368527 PAPOLGQ9BWT3 736 aaKnown RBP8.82□□□□□ -1
TPM3-209ENST00000368527 TAF9BQ9HBM6 251 aa8.82□□□□□ -1
TPM3-209ENST00000368527 TMEM9BQ9NQ34 198 aa8.82□□□□□ -1
TPM3-209ENST00000368527 PARP11Q9NR21 331 aa8.82□□□□□ -1
TPM3-209ENST00000368527 TUBG2Q9NRH3 451 aa8.82□□□□□ -1
TPM3-209ENST00000368527 SLC2A9Q9NRM0 540 aa8.82□□□□□ -1
TPM3-209ENST00000368527 FAM212BQ9NTI7 297 aaPredicted RBP8.82□□□□□ -1
TPM3-209ENST00000368527 ASF1BQ9NVP2 202 aa8.82□□□□□ -1
TPM3-209ENST00000368527 OR5AC2Q9NZP5 309 aa8.82□□□□□ -1
TPM3-209ENST00000368527 LHX6Q9UPM6 363 aa8.82□□□□□ -1
TPM3-209ENST00000368527 CARHSP1Q9Y2V2 147 aaKnown RBP8.82□□□□□ -1
TPM3-209ENST00000368527 LOC105371267A0A1B0GV96 52 aa8.81□□□□□ -1
TPM3-209ENST00000368527 C5orf49A4QMS7 147 aa8.81□□□□□ -1
TPM3-209ENST00000368527 ST8SIA3O43173 380 aa8.81□□□□□ -1
TPM3-209ENST00000368527 OR7C1O76099 320 aaPredicted RBP8.81□□□□□ -1
TPM3-209ENST00000368527 ATG12O94817 140 aa8.81□□□□□ -1
TPM3-209ENST00000368527 CNOT4O95628 575 aaKnown RBP8.81□□□□□ -1
TPM3-209ENST00000368527 NAPSAO96009 420 aa8.81□□□□□ -1
TPM3-209ENST00000368527 APOC3P02656 99 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms