RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MUC20Q8N307 709 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-207ENST00000368226 SLC25A40Q8TBP6 338 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF385AQ96PM9 386 aaKnown RBP11.37□□□□□ -0.59
PTPRK-207ENST00000368226 GPR35Q9HC97 309 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 ARPC4-TTLL3A0A0A6YYG9 625 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF320A2RRD8 509 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 G3V3Q6 166 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 BCL2L11O43521 198 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 PDCD6O75340 191 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 IGKV1D-16P01601 117 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 FGF8P55075 233 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-207ENST00000368226 PIGYQ3MUY2 71 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 C11orf87Q6NUJ2 197 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 SLC16A12Q6ZSM3 486 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF485Q8NCK3 441 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 OR5M8Q8NGP6 311 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 ZPLD1Q8TCW7 415 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 PRRX2Q99811 253 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 AMDHD2Q9Y303 409 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 TRPM6Q9BX84 2022 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 DNASE2O00115 360 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-207ENST00000368226 LIFP15018 202 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 HTN1P15515 57 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 PRRX1P54821 245 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 CCDC190Q86UF4 302 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 OR8B3Q8NGG8 313 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 RAB1CQ92928 201 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 OR8B2Q96RD0 313 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 LSM2Q9Y333 95 aaKnown RBP11.37□□□□□ -0.59
PTPRK-207ENST00000368226 FOCADQ5VW36 1801 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 RFPL4AA6NLU0 287 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 RFPL4AL1F8VTS6 287 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 HAND1O96004 215 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 HRASP01112 189 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 SP1P08047 785 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 CNN1P51911 297 aaKnown RBP11.37□□□□□ -0.59
PTPRK-207ENST00000368226 FAM3AP98173 230 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 FNDC7Q5VTL7 733 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 OR2H1Q9GZK4 316 aa11.37□□□□□ -0.59
PTPRK-207ENST00000368226 TCRBV16S1A1N1A0A5B0 115 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 K7ESF4 209 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
PTPRK-207ENST00000368226 SLC38A11Q08AI6 406 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 RAB32Q13637 225 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 C11orf42Q8N5U0 333 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 OR1L4Q8NGR5 311 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF488Q96MN9 340 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 ATP6V1G2-DDX39BF2Z307 99 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 SMIM17P0DL12 118 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 RHOBP62745 196 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 MDP1Q86V88 176 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 ARRDC1Q8N5I2 433 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 OR5C1Q8NGR4 320 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 SLIRPQ9GZT3 109 aaKnown RBP11.36□□□□□ -0.59
PTPRK-207ENST00000368226 IGHV3-21A0A0B4J1V1 117 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 DEFA6Q01524 100 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 OR5D13Q8NGL4 314 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 GPR27Q9NS67 375 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 BRWD1Q9NSI6 2320 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 C19orf48Q6RUI8 117 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 OR1B1Q8NGR6 318 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 AAMDCQ9H7C9 122 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 TCAPO15273 167 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 ACTL6AO96019 429 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 CTSBP07858 339 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 ADRB1P08588 477 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 REG1BP48304 166 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 DHRS2Q13268 280 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 CABLES2Q9BTV7 478 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 UQCC1Q9NVA1 299 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 GOLT1BQ9Y3E0 138 aa11.36□□□□□ -0.59
PTPRK-207ENST00000368226 MIDNQ504T8 468 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 GGNBP1Q5YKI7 109 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 C9orf170A2RU37 121 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 SPAG17Q6Q759 2223 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 TRAV38-1A0A0B4J264 116 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 A0A1W2PQD3 144 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 RAB19A4D1S5 217 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 LRRC3CA6NJW4 275 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 F2RL2O00254 374 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 SFT2D2O95562 160 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 OR4A8P0C604 315 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 MGAT2Q10469 447 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF501Q96CX3 271 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-207ENST00000368226 NDUFB6O95139 128 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 PNPP00491 289 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 IGHA1P01876 353 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 MDH2P40926 338 aaKnown RBP11.35□□□□□ -0.59
PTPRK-207ENST00000368226 TRAPPC2P0DI81 140 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 TRAPPC2BP0DI82 140 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 ENDOGQ14249 297 aaKnown RBP11.35□□□□□ -0.59
PTPRK-207ENST00000368226 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
PTPRK-207ENST00000368226 XKRY2A2RUG3 117 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 RAB7AP51149 207 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 NUFIP2Q7Z417 695 aaKnown RBP11.34□□□□□ -0.59
PTPRK-207ENST00000368226 PTP4A1Q93096 173 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 BTF3L4Q96K17 158 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 PCGF1Q9BSM1 259 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms