RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SH2D2AQ9NP31 389 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 FAM60AQ9NP50 221 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PIPOXQ9P0Z9 390 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 FBXL17Q9UF56 701 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 LIPGQ9Y5X9 500 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 FAM106CPP0CH98 169 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 HIST1H1DP16402 221 aaKnown RBP9.69□□□□□ -0.86
CLIP1-203ENST00000361654 LIMK1P53667 647 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 KIAA0141Q14154 515 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-203ENST00000361654 MMDQ15546 238 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 SMUG1Q53HV7 270 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PRSS41Q7RTY9 318 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 OR2M3Q8NG83 312 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 BLNKQ8WV28 456 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 WDR34Q96EX3 536 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 OR4C12Q96R67 309 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 TTTY12Q9BZ98 90 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 RASL12Q9NYN1 266 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 VSIG4Q9Y279 399 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 J3QT63 122 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 SBK3P0C264 359 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 SCGB1C2P0DMR2 95 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 UBE2MP61081 183 aaKnown RBP9.69□□□□□ -0.86
CLIP1-203ENST00000361654 DMRTC1Q5HYR2 192 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 LAMTOR1Q6IAA8 161 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 VN1R4Q7Z5H5 301 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 ZNF552Q9H707 407 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-203ENST00000361654 IL20Q9NYY1 176 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PCOLCE2Q9UKZ9 415 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 RFPL4AA6NLU0 287 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 RFPL4AL1F8VTS6 287 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 HSBP1O75506 76 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 KIR3DL2P43630 455 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PDLIM4P50479 330 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 SPCS3P61009 180 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 EBLN2Q6P2I7 272 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 RXFP4Q8TDU9 374 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 TMED6Q8WW62 240 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 NOL4LQ96MY1 436 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-203ENST00000361654 VSTM2LQ96N03 204 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 CABLES2Q9BTV7 478 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 CA11O75493 328 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PF4P02776 101 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PATE4P0C8F1 98 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 GCSHP23434 173 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 FFAR4Q5NUL3 377 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 GGNBP1Q5YKI7 109 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 PERPQ96FX8 193 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 ZDHHC11Q9H8X9 412 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 GPR35Q9HC97 309 aa9.69□□□□□ -0.86
CLIP1-203ENST00000361654 ANKRD36CQ5JPF3 1778 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 CCL3P10147 92 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 GAMTQ14353 236 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 PDCD1Q15116 288 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 TSPAN32Q96QS1 320 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 SLC25A10Q9UBX3 287 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-203ENST00000361654 LIPT2A6NK58 231 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 PRR33A8MZF0 331 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 DEFA6Q01524 100 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 WDR38Q5JTN6 314 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 LRRTM1Q86UE6 522 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 PDPNQ86YL7 162 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 NECAP1Q8NC96 275 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 OR1L6Q8NGR2 347 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 OR1B1Q8NGR6 318 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 ZNF426Q9BUY5 554 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 RNF167Q9H6Y7 350 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 CISD1Q9NZ45 108 aaKnown RBP9.68□□□□□ -0.86
CLIP1-203ENST00000361654 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 LIFP15018 202 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 CTSSP25774 331 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 BAP18Q8IXM2 172 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 NFAM1Q8NET5 270 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-203ENST00000361654 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 PRDM14Q9GZV8 571 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 TREM2Q9NZC2 230 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 AUP1Q9Y679 476 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 A0A1W2PS18 150 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 CST7O76096 145 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 CRISP2P16562 243 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 RAB9AP51151 201 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 UNQ9370/PRO34162Q6UXP9 181 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 GLCCI1Q86VQ1 547 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 WFDC3Q8IUB2 231 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 LINC00052Q96N35 136 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 NPAS1Q99742 590 aa9.68□□□□□ -0.86
CLIP1-203ENST00000361654 MEX3AA1L020 520 aaKnown RBP9.67□□□□□ -0.86
CLIP1-203ENST00000361654 CDIPTO14735 213 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-203ENST00000361654 ASAH1Q13510 395 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 FAM219AQ8IW50 185 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 R3HDM4Q96D70 268 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 ARHGAP5-AS1Q96IT6 56 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 FAM103A1Q9BTL3 118 aaKnown RBP9.67□□□□□ -0.86
CLIP1-203ENST00000361654 FAAP24Q9BTP7 215 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 SIRT5Q9NXA8 310 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 NDUFA2O43678 99 aa9.67□□□□□ -0.86
CLIP1-203ENST00000361654 IGHA1P01876 353 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms