RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CCDC54Q8NEL0 328 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 OR51T1Q8NGJ9 327 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 THAP6Q8TBB0 222 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 HAS2Q92819 552 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 MRPS24Q96EL2 167 aaKnown RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF75AQ96N20 296 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 RNF126Q9BV68 326 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 SRXN1Q9BYN0 137 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 SHPKQ9UHJ6 478 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 PADI1Q9ULC6 663 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 OSGIN2Q9Y236 505 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 FAM25EA8MYX2 175 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 STMND1H3BQB6 276 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 CA11O75493 328 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 SFT2D2O95562 160 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 GP1BAP07359 652 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 CRYGSP22914 178 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 SLURP1P55000 103 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 MRPS34P82930 218 aaKnown RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 SMUG1Q53HV7 270 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 IGSF11Q5DX21 431 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 BEX5Q5H9J7 111 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 CLEC18BQ6UXF7 455 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 TFAP2EQ6VUC0 442 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 OR10K1Q8NGX5 313 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 OR13G1Q8NGZ3 307 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 SF3B5Q9BWJ5 86 aaKnown RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 RBM24Q9BX46 236 aaKnown RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 PECRQ9BY49 303 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 MBD2Q9UBB5 411 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 EEF1E1-BLOC1S5C9J1V9 151 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 C9J4A7 227 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 F8VVB4 439 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 F8VWA3 439 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 G3V3Y1 287 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 M0R135 149 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 TNFSF11O14788 317 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 RPS2P15880 293 aaKnown RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 NPY4RP50391 375 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SNAI3Q3KNW1 292 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 PAN3Q58A45 887 aaKnown RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 FAM74A1Q5RGS3 127 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 MAML2Q8IZL2 1156 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 OR5D18Q8NGL1 313 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 OR5H2Q8NGV7 314 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SGK3Q96BR1 496 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF799Q96GE5 643 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 PIGQQ9BRB3 760 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 CHMP1AQ9HD42 196 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 RAB18Q9NP72 206 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 DKKL1Q9UK85 242 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 PIGLQ9Y2B2 252 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ARID1AO14497 2285 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 NSG1A0A0A6YYJ2 146 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 TEX13DA0A0J9YY54 714 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 DHRS7CA6NNS2 312 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SERPINE3A8MV23 424 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 APOC1P02654 83 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 CFIP05156 583 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 HPNP05981 417 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 MC5RP33032 325 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SNU13P55769 128 aaKnown RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 CYCSP99999 105 aaKnown RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ARFRP1Q13795 201 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 KRTAP27-1Q3LI81 207 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 TMEM156Q8N614 296 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SPERTQ8NA61 448 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 INO80EQ8NBZ0 244 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 OR5AP2Q8NGF4 316 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 STOML3Q8TAV4 291 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 JSRP1Q96MG2 331 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SCGB3A2Q96PL1 93 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ST6GALNAC5Q9BVH7 336 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF471Q9BX82 626 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 HPF1Q9NWY4 346 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 GLS2Q9UI32 602 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 KIAA1549Q9HCM3 1950 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 hCG_1809904A0A1W2PP81 198 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 A0A1W2PPE2 198 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 A0A1W2PR64 198 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 C5orf51A6NDU8 294 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 H0YIZ8 118 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SYNGR3O43761 229 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 MTRF1O75570 445 aaKnown RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 FCGR2AP12318 317 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 CNR1P21554 472 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 BLVRBP30043 206 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF84P51523 738 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 TAS2R46P59540 309 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 IL15RAQ13261 267 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SNTB1Q13884 538 aaKnown RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ATXN7L3Q14CW9 347 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-202ENST00000360642 PPA1Q15181 289 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 Q7L0L9 218 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 LURAP1LQ8IV03 231 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 FAM219AQ8IW50 185 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 OR52H1Q8NGJ2 320 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 NPRL2Q8WTW4 380 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 SPTSSAQ969W0 71 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms