RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 GPR12P47775 334 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 SLC35G3Q8N808 338 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 OR5C1Q8NGR4 320 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 CLDN23Q96B33 292 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 HDHD3Q9BSH5 251 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF426Q9BUY5 554 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 NMES1Q9C002 83 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 OPA3Q9H6K4 179 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 NDUFB7P17568 137 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 H1FXQ92522 213 aaKnown RBP14.36□□□□□ -0.11
SCAF1-201ENST00000360565 RGP1Q92546 391 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-201ENST00000360565 SHARPINQ9H0F6 387 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 TMEM218A2RU14 115 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 MT-CO3P00414 261 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 C1orf210Q8IVY1 113 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 CT55Q8WUE5 264 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 MRPL24Q96A35 216 aaKnown RBP14.36□□□□□ -0.11
SCAF1-201ENST00000360565 UHRF2Q96PU4 802 aa14.36□□□□□ -0.11
SCAF1-201ENST00000360565 TSTD3H0UI37 97 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 PGA3P0DJD8 388 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 POLR2GP62487 172 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCAF1-201ENST00000360565 PMP22Q01453 160 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF816Q0VGE8 651 aaPredicted RBP14.35□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF519Q8TB69 540 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 GALMQ96C23 342 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 SAMD10Q9BYL1 202 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 LPAR5Q9H1C0 372 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 IL2RAP01589 272 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 TNFSF18Q9UNG2 199 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 FREM3P0C091 2139 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 MDFIC2A0A1B0GVS7 189 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 PMS2P1A4D2B8 440 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 MASP2O00187 686 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 CALCRP30988 508 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 MEOX1P50221 254 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 H2BFSP57053 126 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 CLPPQ16740 277 aaPredicted RBP14.35□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF260Q3ZCT1 412 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 C1orf100Q5SVJ3 147 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 C1orf87Q8N0U7 546 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 RFESDQ8TAC1 157 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 NANPQ8TBE9 248 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 ERGIC1Q969X5 290 aa14.35□□□□□ -0.11
SCAF1-201ENST00000360565 SHISA7A6NL88 538 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 ENSAO43768 121 aaKnown RBP14.34□□□□□ -0.11
SCAF1-201ENST00000360565 DVL1P1P54792 670 aaPredicted RBP14.34□□□□□ -0.11
SCAF1-201ENST00000360565 RNPS1Q15287 305 aaKnown RBP14.34□□□□□ -0.11
SCAF1-201ENST00000360565 PIGYQ3MUY2 71 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 PROCRQ9UNN8 238 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 A0A1W2PR77 199 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 TUSC5Q8IXB3 177 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 DYRK2Q92630 601 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 ADAT1Q9BUB4 502 aaKnown RBP14.34□□□□□ -0.11
SCAF1-201ENST00000360565 UQCC1Q9NVA1 299 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 ADAM10O14672 748 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 CST2P09228 141 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 ADGRG7Q96K78 797 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 C12orf57Q99622 126 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 CLEC12BQ2HXU8 276 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 C10orf35Q96D05 121 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 SMIM7Q9BQ49 75 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 WDR54Q9H977 334 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 SLC2A9Q9NRM0 540 aa14.34□□□□□ -0.11
SCAF1-201ENST00000360565 RPS16P62249 146 aaKnown RBP14.33□□□□□ -0.11
SCAF1-201ENST00000360565 RPS11P62280 158 aaKnown RBP eCLIP14.33□□□□□ -0.11
SCAF1-201ENST00000360565 DEFB109BQ30KR1 87 aa14.33□□□□□ -0.11
SCAF1-201ENST00000360565 TMEM41BQ5BJD5 291 aa14.33□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF561Q8N587 486 aa14.33□□□□□ -0.11
SCAF1-201ENST00000360565 COMMD1Q8N668 190 aa14.33□□□□□ -0.11
SCAF1-201ENST00000360565 OR4F5Q8NH21 305 aa14.33□□□□□ -0.11
SCAF1-201ENST00000360565 OR4F4Q96R69 305 aa14.33□□□□□ -0.11
SCAF1-201ENST00000360565 TMEM38BQ9NVV0 291 aa14.33□□□□□ -0.11
SCAF1-201ENST00000360565 ZNF646O15015 1829 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-201ENST00000360565 NBASA2RRP1 2371 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 PPP5D1E7EU14 171 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 NGFP01138 241 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 C3AR1Q16581 482 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 HOGA1Q86XE5 327 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 SAT2Q96F10 170 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-201ENST00000360565 ISG15P05161 165 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 ZNF766Q5HY98 468 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 ZNF660Q6AZW8 331 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-201ENST00000360565 NTNG2Q96CW9 530 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 PATZ1Q9HBE1 687 aaKnown RBP14.33□□□□□ -0.12
SCAF1-201ENST00000360565 NPDC1Q9NQX5 325 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-201ENST00000360565 LHFPL6Q9Y693 200 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 RALGAPA1Q6GYQ0 2036 aa14.33□□□□□ -0.12
SCAF1-201ENST00000360565 PGA4P0DJD7 388 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 IL13RA2Q14627 380 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 FAM209AQ5JX71 171 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 LYZL2Q7Z4W2 148 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 NECAP1Q8NC96 275 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 CABLES2Q9BTV7 478 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 OR2H1Q9GZK4 316 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 NGBQ9NPG2 151 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 TP53BP1Q12888 1972 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-201ENST00000360565 LYZL6O75951 148 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 GAS1P54826 345 aa14.32□□□□□ -0.12
SCAF1-201ENST00000360565 C4orf17Q53FE4 359 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms