RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 TRGC2P03986 189 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 PGA4P0DJD7 388 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 PGA5P0DJD9 388 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 IGFBP7Q16270 282 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 VMA21Q3ZAQ7 101 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 LDLRAD1Q5T700 205 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 C17orf99Q6UX52 265 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 THSD4Q6ZMP0 1018 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 RPS4Y2Q8TD47 263 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 APOBEC3DQ96AK3 386 aaPredicted RBP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 ADAT3Q96EY9 351 aaPredicted RBP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 GPR61Q9BZJ8 451 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 RCC2Q9P258 522 aaKnown RBP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 MFSD2BA6NFX1 497 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 PAGE4O60829 102 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 PDCD6O75340 191 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 IFITM2Q01629 132 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 KCNE4Q8WWG9 221 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 ALKBH3Q96Q83 286 aaPredicted RBP11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 OR2D2Q9H210 308 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 DMRT1Q9Y5R6 373 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 LRP6O75581 1613 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 TRGV10A0A0A0MS01 117 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 H0Y8X5 98 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 NGFP01138 241 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 MISP3Q96FF7 219 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 TSPAN32Q96QS1 320 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 PECRQ9BY49 303 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 TWSG1Q9GZX9 223 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 TAAR3PQ9P1P4 343 aa11.93□□□□□ -0.5
CCDC144A-203ENST00000360495 F5H697 171 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 PPM1DO15297 605 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 SPATA46Q5T0L3 261 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 DEGS2Q6QHC5 323 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 TBC1D26Q86UD7 250 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 OR8A1Q8NGG7 326 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 C8orf44Q96CB5 159 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 SPOCK3Q9BQ16 436 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 HSPB9Q9BQS6 159 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 CA2P00918 260 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 HMGA1P17096 107 aaKnown RBP11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 CDKN2AP42771 156 aaKnown RBP11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 CEACAM16Q2WEN9 425 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 ZNF770Q6IQ21 691 aaPredicted RBP11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 PSG11Q9UQ72 335 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 RER1O15258 196 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 OGG1O15527 345 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 PDE6DO43924 150 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 SUMO3P55854 103 aaPredicted RBP11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 SPATA45Q537H7 98 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 LEMD1Q68G75 181 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 TIMD4Q96H15 378 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 DDA1Q9BW61 102 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 CXorf65A6NEN9 183 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 ADPRHP54922 357 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 HERVK_113P61574 105 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 ANKRD55Q3KP44 614 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 SLC35E3Q7Z769 313 aa11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 MRPL30Q8TCC3 161 aaKnown RBP11.92□□□□□ -0.5
CCDC144A-203ENST00000360495 A0A1W2PR80 420 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 DEFB108AA8MXU0 73 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 BRS3P32247 399 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 GNG3P63215 75 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 IRF3Q14653 427 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 FAM219AQ8IW50 185 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 Q8IYB0 196 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 OR4A4PQ8NGN8 299 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 FOXB1Q99853 325 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 AKIRIN1Q9H9L7 192 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 KIF13AQ9H1H9 1805 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 CDC42EP2O14613 210 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 RCC1P18754 421 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 CD82P27701 267 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 OR3A1P47881 315 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 B4GALNT1Q00973 533 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 MRM2Q9UI43 246 aaKnown RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 MRPS2Q9Y399 296 aaKnown RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 KHDC3LQ587J8 217 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 ZNF547Q8IVP9 402 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 ADAD2Q8NCV1 583 aaKnown RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 AURKAIP1Q9NWT8 199 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 ACTL6AO96019 429 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 CRYAAP02489 173 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 CD226Q15762 336 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 RTN4RL1Q86UN2 441 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 VN1R2Q8NFZ6 395 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 NT5CQ8TCD5 201 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 LRRC3BQ96PB8 259 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 ANXA10Q9UJ72 324 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 SDK1Q7Z5N4 2213 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 SMPD2O60906 423 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 P01737 135 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 CD40P25942 277 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 HOXA6P31267 233 aa11.91□□□□□ -0.5
CCDC144A-203ENST00000360495 AESQ08117 197 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms