RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 RAB18Q9NP72 206 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CISD1Q9NZ45 108 aaKnown RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 ST6GALNAC2Q9UJ37 374 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 SHOXO15266 292 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 NGFP01138 241 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 MBP02144 154 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 HPNP05981 417 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 ADH4P08319 380 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CT45A6P0DMU7 189 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CT45A5P0DMU8 189 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CT45A7P0DMV0 189 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 ASCL1P50553 236 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CT45A1Q5HYN5 189 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 ZBTB37Q5TC79 503 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 LINC00596Q86U02 117 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 OR4S1Q8NGB4 309 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CT45A3Q8NHU0 189 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 FAM57AQ8TBR7 257 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 FBXW5Q969U6 566 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CMBLQ96DG6 245 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CHST5Q9GZS9 411 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 BARX1Q9HBU1 254 aaPredicted RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 LSM2Q9Y333 95 aaKnown RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 IGLV3-12A0A075B6K2 115 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CA6P23280 308 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 RPL12P30050 165 aaKnown RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 RAB7AP51149 207 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 LSM11P83369 360 aaKnown RBP eCLIP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 RBMXL3Q8N7X1 1067 aaKnown RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 OR10P1Q8NGE3 313 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 SDSLQ96GA7 329 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 GPR137Q96N19 417 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 KCNK17Q96T54 332 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 GP6Q9HCN6 339 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 FLVCR2Q9UPI3 526 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 ERHP84090 104 aaKnown RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 CLINT1Q14677 625 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 TMEM91Q6ZNR0 172 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 ST8SIA4Q92187 359 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 YIPF5Q969M3 257 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 UCN2Q96RP3 112 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 ABHD1Q96SE0 405 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 TINAGL1Q9GZM7 467 aaPredicted RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 TREM2Q9NZC2 230 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 OR6C3Q9NZP0 311 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 FOXD3Q9UJU5 478 aaPredicted RBP6.16□□□□□ -1.42
RAB5B-201ENST00000360299 SCN8AQ9UQD0 1980 aa6.16□□□□□ -1.42
RAB5B-201ENST00000360299 OBSL1O75147 1896 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 FAM221AA4D161 298 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 RAB19A4D1S5 217 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 TMEM210A6NLX4 147 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 NPIPB9F8W1W9 429 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 AQP7O14520 342 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 CCSO14618 274 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 PNPP00491 289 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 DTYMKP23919 212 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 SLC6A1P30531 599 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 GUCA2AQ02747 115 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 ZNF658BQ4V348 819 aaPredicted RBP6.15□□□□□ -1.42
RAB5B-201ENST00000360299 SOHLH1Q5JUK2 328 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 BAP18Q8IXM2 172 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 HSD17B11Q8NBQ5 300 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 RPS4Y2Q8TD47 263 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 PIMREGQ9BSJ6 248 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 NXF2Q9GZY0 626 aaKnown RBP6.15□□□□□ -1.42
RAB5B-201ENST00000360299 RPS10P5Q9NQ39 176 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 PPP1R3CQ9UQK1 317 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 SZT2Q5T011 3432 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 ZNF318Q5VUA4 2279 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 RFPL4AA6NLU0 287 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 RFPL4AL1F8VTS6 287 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 J3QT63 122 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 C1QCP02747 245 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 PPT1P50897 306 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 SNRPNP63162 240 aaKnown RBP6.15□□□□□ -1.42
RAB5B-201ENST00000360299 INSL4Q14641 139 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 C11orf91Q3C1V1 193 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 KRBOX4Q5JUW0 171 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 SLC25A47Q6Q0C1 308 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 CD200R1LQ6Q8B3 271 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 Q6ZRG5 221 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 SLC35E1Q96K37 410 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 PTDSS2Q9BVG9 487 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 KIAA1456Q9P272 454 aa6.15□□□□□ -1.42
RAB5B-201ENST00000360299 DHRS7CA6NNS2 312 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 DUS4LO95620 317 aaKnown RBP6.15□□□□□ -1.43
RAB5B-201ENST00000360299 IGHMP01871 453 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 ISG15P05161 165 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 RAB13P51153 203 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 S100A12P80511 92 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 PRR30Q53SZ7 412 aaPredicted RBP6.15□□□□□ -1.43
RAB5B-201ENST00000360299 FAAP20Q6NZ36 180 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 OR2G3Q8NGZ4 309 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 FAM131CQ96AQ9 280 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 MAP6Q96JE9 813 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 COMMD5Q9GZQ3 224 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 CA10Q9NS85 328 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 RNF115Q9Y4L5 304 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 CCDC88CQ9P219 2028 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms