RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 OR6C3Q9NZP0 311 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 TSC2P49815 1807 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 PPP1R1AQ13522 171 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 CIRBPQ14011 172 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 OR4S2Q8NH73 311 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SNRNP40Q96DI7 357 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 MGPP08493 103 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 ATF1P18846 271 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SRP14P37108 136 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 PPICP45877 212 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SIRT6Q8N6T7 355 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 LIPGQ9Y5X9 500 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 IDSB3KWA1 339 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 CCR2P41597 374 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM33P57088 247 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 IGKV6D-21A0A0A0MT36 114 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 NPEPL1Q8NDH3 523 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 MARVELD1Q9BSK0 173 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 BCL2L10Q9HD36 194 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 MBNL1Q9NR56 388 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 B4GALT1P15291 398 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 HFEQ30201 348 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 NHLRC1Q6VVB1 395 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 WNK3Q9BYP7 1800 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 PPP1CCP36873 323 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SPPL3Q8TCT6 385 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 GABRG3Q99928 467 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SFT2D2O95562 160 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 FGF9P31371 208 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 P2RY1P47900 373 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 PCBP3P57721 371 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 PPIAP62937 165 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 ST3GAL2Q16842 350 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 NCMAPQ5T1S8 102 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 PAQR6Q6TCH4 344 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM136Q6ZRR5 245 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 OR2Z1Q8NG97 314 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 C11orf68Q9H3H3 251 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 LRP12Q9Y561 859 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SOX21Q9Y651 276 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 MBLAC1A4D2B0 266 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 GSTZ1O43708 216 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 B3GALT4O96024 378 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 HPXP02790 462 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 ERVFRD-1P60508 538 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 CA10Q9NS85 328 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SLCO1C1Q9NYB5 712 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 TPRP12270 2363 aaKnown RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 CXorf1O96002 111 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 NGFP01138 241 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 DUSP2Q05923 314 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 OR4B1Q8NGF8 309 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 TEX37Q96LM6 180 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM38BQ9NVV0 291 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 A4GNTQ9UNA3 340 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 CA3P07451 260 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 HOXA6P31267 233 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 BVESQ8NE79 360 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SIGLEC1Q9BZZ2 1709 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 PNLIPRP2P54317 469 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 MUC20Q8N307 709 aaPredicted RBP8.32□□□□□ -1.08
VPS13A-203ENST00000360280 OTOSQ8NHW6 89 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 SIT1Q9Y3P8 196 aa8.32□□□□□ -1.08
VPS13A-203ENST00000360280 UBE2L6O14933 153 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 PAFAH1B2P68402 229 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 TWIST1Q15672 202 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 CLPPQ16740 277 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 SLC35E3Q7Z769 313 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 MRGPREQ86SM8 312 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 LYG1Q8N1E2 194 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 OR2W5A6NFC9 320 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 HIST1H1DP16402 221 aaKnown RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 AVPR2P30518 371 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 PARM1Q6UWI2 310 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 K7EQS6 105 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF195O14628 629 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF750Q32MQ0 723 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 FBXL17Q9UF56 701 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 PSG11Q9UQ72 335 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ARFGEF1Q9Y6D6 1849 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 ARHGAP5-AS1Q96IT6 56 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 PATJQ8NI35 1801 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 FRG2CA6NGY1 282 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 HRO43593 1189 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 SPRY1O43609 319 aaPredicted RBP8.31□□□□□ -1.08
VPS13A-203ENST00000360280 SPATA45Q537H7 98 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 DOK5Q9P104 306 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 USP54Q70EL1 1684 aa8.31□□□□□ -1.08
VPS13A-203ENST00000360280 H7C2G1 150 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms