RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 PLEKHB1Q9UF11 243 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-202ENST00000358808 ANXA10Q9UJ72 324 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 B9D1Q9UPM9 204 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 QSER1Q2KHR3 1735 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 CACNA1CQ13936 2221 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 OR2A25A4D2G3 310 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 IGHA1P01876 353 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 IGHA2P01877 340 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 GPNMBQ14956 572 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 ANKRD55Q3KP44 614 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 SEZ6L2Q6UXD5 910 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 PTOV1Q86YD1 416 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 C1orf210Q8IVY1 113 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 FAM210BQ96KR6 192 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 TEX37Q96LM6 180 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 CNTD2Q9H8S5 307 aa9.08□□□□□ -0.96
CLIP1-202ENST00000358808 H7C2G1 150 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF737O75373 536 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 PTGFRP43088 359 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 RIGQ13278 110 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 TRA2AQ13595 282 aaKnown RBP eCLIP9.07□□□□□ -0.963e-12■■■■□ 21.3
CLIP1-202ENST00000358808 OR8I2Q8N0Y5 310 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 C19orf43Q9BQ61 176 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 IL17BQ9UHF5 180 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 A0A0B4J293 547 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 MFSD2BA6NFX1 497 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 METTL12A8MUP2 240 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 MFNGO00587 321 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 GSTZ1O43708 216 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-202ENST00000358808 FOXO1Q12778 655 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 Q6ZS52 159 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF561Q8N587 486 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 VSTM2AQ8TAG5 236 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 RSG1Q9BU20 258 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 KCNK15Q9H427 330 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 SAP30LQ9HAJ7 183 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 LRRC37AA6NMS7 1700 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 WDR90Q96KV7 1748 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 KIAA1551Q9HCM1 1747 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 A0A087WUJ7 227 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 IGKV3D-11A0A0A0MRZ8 115 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 P01737 135 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 IGKV3-11P04433 115 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 GABRA1P14867 456 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 VDAC1P21796 283 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 RELBQ01201 579 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 SSPNQ14714 243 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 GUK1Q16774 197 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 LSMEM1Q8N8F7 131 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 OR4P4Q8NGL7 312 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 PP6455Q8WZ26 134 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 WNT16Q9UBV4 365 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 MRPS11P82912 194 aaKnown RBP9.07□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM241Q24JQ0 296 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 SPANXN1Q5VSR9 72 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 WDR73Q6P4I2 378 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 OR10A7Q8NGE5 316 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 OR52B4Q8NGK2 314 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 PTX4Q96A99 478 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 PIK3IP1Q96FE7 263 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 PERPQ96FX8 193 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 GNRHR2Q96P88 292 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 LRRC61Q9BV99 259 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 CYSLTR2Q9NS75 346 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 FOXJ3Q9UPW0 622 aa9.07□□□□□ -0.96
CLIP1-202ENST00000358808 IFITM5A6NNB3 132 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 DHRS7CA6NNS2 312 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 KLF7O75840 302 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF205O95201 554 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 HLA-GP17693 338 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 CTGFP29279 349 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SLC35B1P78383 322 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM215Q68D42 235 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 ASCL5Q7RTU5 278 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 WDR13Q9H1Z4 485 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 CCL21O00585 134 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SFTPCP11686 197 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 CD226Q15762 336 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM196Q5HYL7 178 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 PABPC1L2AQ5JQF8 200 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF774Q6NX45 483 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 OR4S2Q8NH73 311 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 MZB1Q8WU39 189 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SPSB1Q96BD6 273 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 SMIM19Q96E16 107 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 BCL2L11O43521 198 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 MEOX2P50222 304 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 FUT7Q11130 342 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 GGTLC2Q14390 218 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 OR8A1Q8NGG7 326 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 PPP1R1CQ8WVI7 109 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 AUNIPQ9H7T9 357 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 LRP12Q9Y561 859 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 MTCH2Q9Y6C9 303 aa9.06□□□□□ -0.96
CLIP1-202ENST00000358808 IGSF23A1L1A6 192 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms