RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 RUNX1Q01196 453 aa8.79□□□□□ -1
RNF40-202ENST00000357890 TMEM268Q5VZI3 342 aa8.79□□□□□ -1
RNF40-202ENST00000357890 FAHD2BQ6P2I3 314 aaPredicted RBP8.79□□□□□ -1
RNF40-202ENST00000357890 BTNL8Q6UX41 500 aa8.79□□□□□ -1
RNF40-202ENST00000357890 Q7L0L9 218 aa8.79□□□□□ -1
RNF40-202ENST00000357890 LRRC75AQ8NAA5 344 aa8.79□□□□□ -1
RNF40-202ENST00000357890 RBMXL1Q96E39 390 aaKnown RBP8.79□□□□□ -1
RNF40-202ENST00000357890 FAHD2AQ96GK7 314 aa8.79□□□□□ -1
RNF40-202ENST00000357890 RBM24Q9BX46 236 aaKnown RBP8.79□□□□□ -1
RNF40-202ENST00000357890 RTN4RQ9BZR6 473 aa8.79□□□□□ -1
RNF40-202ENST00000357890 PLK3Q9H4B4 646 aa8.79□□□□□ -1
RNF40-202ENST00000357890 ZNF160Q9HCG1 818 aa8.79□□□□□ -1
RNF40-202ENST00000357890 SLC5A6Q9Y289 635 aa8.79□□□□□ -1
RNF40-202ENST00000357890 ANKUB1A6NFN9 424 aa8.79□□□□□ -1
RNF40-202ENST00000357890 F8VVB4 439 aa8.79□□□□□ -1
RNF40-202ENST00000357890 F8VWA3 439 aa8.79□□□□□ -1
RNF40-202ENST00000357890 CD5P06127 495 aa8.79□□□□□ -1
RNF40-202ENST00000357890 S100A7P31151 101 aa8.79□□□□□ -1
RNF40-202ENST00000357890 OR3A4PP47883 348 aa8.79□□□□□ -1
RNF40-202ENST00000357890 NOVA1P51513 510 aaKnown RBP8.79□□□□□ -1
RNF40-202ENST00000357890 LSM6P62312 80 aaKnown RBP8.79□□□□□ -1
RNF40-202ENST00000357890 GABREP78334 506 aa8.79□□□□□ -1
RNF40-202ENST00000357890 DTWD2Q8NBA8 298 aa8.79□□□□□ -1
RNF40-202ENST00000357890 M1APQ8TC57 530 aa8.79□□□□□ -1
RNF40-202ENST00000357890 SOX7Q9BT81 388 aa8.79□□□□□ -1
RNF40-202ENST00000357890 FAM103A1Q9BTL3 118 aaKnown RBP8.79□□□□□ -1
RNF40-202ENST00000357890 RNF122Q9H9V4 155 aa8.79□□□□□ -1
RNF40-202ENST00000357890 FUT9Q9Y231 359 aa8.79□□□□□ -1
RNF40-202ENST00000357890 MUC22E2RYF6 1773 aaPredicted RBP8.79□□□□□ -1
RNF40-202ENST00000357890 A0A1B0GX78 115 aa8.79□□□□□ -1
RNF40-202ENST00000357890 LOC390937A0A1W2PQ73 354 aa8.79□□□□□ -1
RNF40-202ENST00000357890 LMO7DNF2Z398 122 aa8.79□□□□□ -1
RNF40-202ENST00000357890 HBE1P02100 147 aa8.79□□□□□ -1
RNF40-202ENST00000357890 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
RNF40-202ENST00000357890 OR5H8P0DN80 308 aa8.79□□□□□ -1
RNF40-202ENST00000357890 NKX2-1P43699 371 aaPredicted RBP8.79□□□□□ -1
RNF40-202ENST00000357890 TNFRSF9Q07011 255 aa8.79□□□□□ -1
RNF40-202ENST00000357890 TMEM176BQ3YBM2 270 aaPredicted RBP8.79□□□□□ -1
RNF40-202ENST00000357890 DBX2Q6ZNG2 339 aa8.79□□□□□ -1
RNF40-202ENST00000357890 LRRC18Q8N456 261 aa8.79□□□□□ -1
RNF40-202ENST00000357890 OR1N1Q8NGS0 311 aa8.79□□□□□ -1
RNF40-202ENST00000357890 FOXQ1Q9C009 403 aa8.79□□□□□ -1
RNF40-202ENST00000357890 UCK1Q9HA47 277 aa8.79□□□□□ -1
RNF40-202ENST00000357890 PITPNC1Q9UKF7 332 aa8.79□□□□□ -1
RNF40-202ENST00000357890 TIMM8BQ9Y5J9 83 aaPredicted RBP8.79□□□□□ -1
RNF40-202ENST00000357890 TRBV11-1A0A0K0K1C0 115 aa8.78□□□□□ -1
RNF40-202ENST00000357890 C2CD4DB7Z1M9 353 aa8.78□□□□□ -1
RNF40-202ENST00000357890 RAD51DO75771 328 aa8.78□□□□□ -1
RNF40-202ENST00000357890 OR5AC1P0C628 307 aa8.78□□□□□ -1
RNF40-202ENST00000357890 HIST1H1DP16402 221 aaKnown RBP8.78□□□□□ -1
RNF40-202ENST00000357890 PAX5Q02548 391 aa8.78□□□□□ -1
RNF40-202ENST00000357890 RTL6Q6ICC9 239 aa8.78□□□□□ -1
RNF40-202ENST00000357890 ADAT3Q96EY9 351 aaPredicted RBP8.78□□□□□ -1
RNF40-202ENST00000357890 A0A1W2PQD3 144 aa8.78□□□□□ -1
RNF40-202ENST00000357890 IGHV2-5P01817 119 aa8.78□□□□□ -1
RNF40-202ENST00000357890 ZNF735P0CB33 412 aa8.78□□□□□ -1
RNF40-202ENST00000357890 ZNF708P17019 499 aa8.78□□□□□ -1
RNF40-202ENST00000357890 PTTG1IPP53801 180 aa8.78□□□□□ -1
RNF40-202ENST00000357890 PDCD1Q15116 288 aa8.78□□□□□ -1
RNF40-202ENST00000357890 ZNF260Q3ZCT1 412 aa8.78□□□□□ -1
RNF40-202ENST00000357890 PRAMEF20Q5VT98 475 aa8.78□□□□□ -1
RNF40-202ENST00000357890 CDCP2Q5VXM1 449 aa8.78□□□□□ -1
RNF40-202ENST00000357890 HEPN1Q6WQI6 88 aa8.78□□□□□ -1
RNF40-202ENST00000357890 LYZL2Q7Z4W2 148 aa8.78□□□□□ -1
RNF40-202ENST00000357890 RTN4RL2Q86UN3 420 aa8.78□□□□□ -1
RNF40-202ENST00000357890 C20orf196Q8IYI0 205 aa8.78□□□□□ -1
RNF40-202ENST00000357890 OR5C1Q8NGR4 320 aa8.78□□□□□ -1
RNF40-202ENST00000357890 ZNF721Q8TF20 911 aa8.78□□□□□ -1
RNF40-202ENST00000357890 NTNG2Q96CW9 530 aa8.78□□□□□ -1
RNF40-202ENST00000357890 MS4A10Q96PG2 267 aa8.78□□□□□ -1
RNF40-202ENST00000357890 DEFB126Q9BYW3 111 aa8.78□□□□□ -1
RNF40-202ENST00000357890 SLC25A31Q9H0C2 315 aa8.78□□□□□ -1
RNF40-202ENST00000357890 TMEM100Q9NV29 134 aa8.78□□□□□ -1
RNF40-202ENST00000357890 PTPRSQ13332 1948 aa8.78□□□□□ -1
RNF40-202ENST00000357890 IGLV1-36A0A0B4J1U3 117 aa8.78□□□□□ -1
RNF40-202ENST00000357890 HSPB6O14558 160 aa8.78□□□□□ -1
RNF40-202ENST00000357890 SIAH2O43255 324 aa8.78□□□□□ -1
RNF40-202ENST00000357890 BPNT1O95861 308 aa8.78□□□□□ -1
RNF40-202ENST00000357890 TBPP20226 339 aa8.78□□□□□ -1
RNF40-202ENST00000357890 HNF1AP20823 631 aa8.78□□□□□ -1
RNF40-202ENST00000357890 BMP5P22003 454 aa8.78□□□□□ -1
RNF40-202ENST00000357890 DUSP1P28562 367 aa8.78□□□□□ -1
RNF40-202ENST00000357890 S100GP29377 79 aa8.78□□□□□ -1
RNF40-202ENST00000357890 RND3P61587 244 aa8.78□□□□□ -1
RNF40-202ENST00000357890 ZNF787Q6DD87 383 aa8.78□□□□□ -1
RNF40-202ENST00000357890 SYT13Q7L8C5 426 aa8.78□□□□□ -1
RNF40-202ENST00000357890 C9orf40Q8IXQ3 194 aa8.78□□□□□ -1
RNF40-202ENST00000357890 RPS4Y2Q8TD47 263 aa8.78□□□□□ -1
RNF40-202ENST00000357890 SDSLQ96GA7 329 aa8.78□□□□□ -1
RNF40-202ENST00000357890 NOL4LQ96MY1 436 aaPredicted RBP8.78□□□□□ -1
RNF40-202ENST00000357890 PLEK2Q9NYT0 353 aa8.78□□□□□ -1
RNF40-202ENST00000357890 RFNGQ9Y644 331 aa8.78□□□□□ -1
RNF40-202ENST00000357890 V9GYS6 101 aa8.78□□□□□ -1
RNF40-202ENST00000357890 RER1O15258 196 aa8.77□□□□□ -1
RNF40-202ENST00000357890 DDAH2O95865 285 aa8.77□□□□□ -1
RNF40-202ENST00000357890 COX5BP10606 129 aa8.77□□□□□ -1
RNF40-202ENST00000357890 NUTF2P61970 127 aaKnown RBP8.77□□□□□ -1
RNF40-202ENST00000357890 ROM1Q03395 351 aa8.77□□□□□ -1
RNF40-202ENST00000357890 FOXF1Q12946 379 aa8.77□□□□□ -1
RNF40-202ENST00000357890 CLN3Q13286 438 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms